RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 PRDM1O75626 825 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 MAGEB6Q8N7X4 407 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 FANCCQ00597 558 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 PDE4CQ08493 712 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 MYSM1Q5VVJ2 828 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 DHX58Q96C10 678 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 CAVIN2O95810 425 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 ATP1A3P13637 1013 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 SMAP1Q8IYB5 467 aaPredicted RBP18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 TCHHQ07283 1943 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
PDZRN3-201ENST00000263666 PFKFB1P16118 471 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 KIAA1468Q9P260 1216 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 MBD4O95243 580 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 KRT40Q6A162 431 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 NAA16Q6N069 864 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 MFSD6Q6ZSS7 791 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 ZNF710Q8N1W2 664 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 CCDC12Q8WUD4 166 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 DLC1Q96QB1 1528 aa18.62■□□□□ 0.57
PDZRN3-201ENST00000263666 ELP1O95163 1332 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 CYP27B1O15528 508 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 XBP1P17861 261 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 ITGA6P23229 1130 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 KRT222Q8N1A0 295 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 MAPK8IP1Q9UQF2 711 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 MARCH6O60337 910 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 ADGRL3Q9HAR2 1447 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 ERBB3P21860 1342 aa18.61■□□□□ 0.57
PDZRN3-201ENST00000263666 CASQ1P31415 396 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 ANKRD20A12PQ8NF67 263 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 SMARCE1Q969G3 411 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 CARD6Q9BX69 1037 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 FILIP1LQ4L180 1135 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 DESI2Q9BSY9 194 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 FAM193AP78312 1265 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 LLPHQ9BRT6 129 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 IRS4O14654 1257 aaPredicted RBP18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 ZPR1O75312 459 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 ADKP55263 362 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 CCDC150Q8NCX0 1101 aa18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 PUF60Q9UHX1 559 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-201ENST00000263666 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 NCBP1Q09161 790 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 FAM98CQ17RN3 349 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 PLIN2Q99541 437 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 GRAMD1CQ8IYS0 662 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 APPBP2Q92624 585 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 BRMS1Q9HCU9 246 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 CARMIL3Q8ND23 1372 aa18.59■□□□□ 0.57
PDZRN3-201ENST00000263666 SCARF1Q14162 830 aa18.58■□□□□ 0.57
PDZRN3-201ENST00000263666 WTAPQ15007 396 aa18.58■□□□□ 0.57
PDZRN3-201ENST00000263666 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
PDZRN3-201ENST00000263666 ZNF532Q9HCE3 1301 aa18.58■□□□□ 0.57
PDZRN3-201ENST00000263666 ZMYM1Q5SVZ6 1142 aa18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 GOLGA6L1Q8N7Z2 621 aa18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 RCOR1Q9UKL0 485 aa18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 ANGEL1Q9UNK9 670 aaKnown RBP18.58■□□□□ 0.56
PDZRN3-201ENST00000263666 ZFYP08048 801 aaPredicted RBP18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 NAP1L1P55209 391 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 RTN1Q16799 776 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 ADALQ6DHV7 355 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 CCDC24Q8N4L8 307 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 DSCC1Q9BVC3 393 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 MCM6Q14566 821 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 FANCLQ9NW38 375 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 KCNH3Q9ULD8 1083 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 DNA2P51530 1060 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 MYL5Q02045 173 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 CAGE1Q8TC20 777 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 EEF2KMTQ96G04 330 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 KIF2AO00139 706 aaPredicted RBP18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
PDZRN3-201ENST00000263666 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 SPATA31D1Q6ZQQ2 1576 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 CCDC102AQ96A19 550 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 NOL10Q9BSC4 688 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms