RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 FGFR2P21802 821 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 ARFGEF1Q9Y6D6 1849 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 CACNA1SQ13698 1873 aa20.97■□□□□ 0.95
SSB-201ENST00000260956 DCAF8L1A6NGE4 600 aa20.97■□□□□ 0.95
SSB-201ENST00000260956 NFKBIEO00221 500 aa20.97■□□□□ 0.95
SSB-201ENST00000260956 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
SSB-201ENST00000260956 SNED1Q8TER0 1413 aa20.96■□□□□ 0.95
SSB-201ENST00000260956 MCAMP43121 646 aa20.96■□□□□ 0.95
SSB-201ENST00000260956 TAF7LQ5H9L4 462 aa20.96■□□□□ 0.95
SSB-201ENST00000260956 TTC39AQ5SRH9 613 aa20.96■□□□□ 0.95
SSB-201ENST00000260956 LDHAL6AQ6ZMR3 332 aa20.96■□□□□ 0.95
SSB-201ENST00000260956 ZFYP08048 801 aaPredicted RBP20.95■□□□□ 0.94
SSB-201ENST00000260956 ZAP70P43403 619 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 RASSF7Q02833 373 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 GRAPQ13588 217 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 METTL24Q5JXM2 366 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
SSB-201ENST00000260956 EXOSC10Q01780 885 aaKnown RBP20.95■□□□□ 0.94
SSB-201ENST00000260956 PI16Q6UXB8 463 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 GTF3C6Q969F1 213 aa20.95■□□□□ 0.94
SSB-201ENST00000260956 PPEF1O14829 653 aaPredicted RBP20.94■□□□□ 0.94
SSB-201ENST00000260956 DTNBO60941 627 aa20.94■□□□□ 0.94
SSB-201ENST00000260956 GADD45BO75293 160 aaPredicted RBP20.94■□□□□ 0.94
SSB-201ENST00000260956 PDE8BO95263 885 aa20.94■□□□□ 0.94
SSB-201ENST00000260956 ARID4AP29374 1257 aaPredicted RBP20.94■□□□□ 0.94
SSB-201ENST00000260956 CCDC152Q4G0S7 254 aa20.94■□□□□ 0.94
SSB-201ENST00000260956 USP48Q86UV5 1035 aa20.94■□□□□ 0.94
SSB-201ENST00000260956 APPBP2Q92624 585 aa20.93■□□□□ 0.94
SSB-201ENST00000260956 GDPD2Q9HCC8 539 aa20.93■□□□□ 0.94
SSB-201ENST00000260956 FBXL16Q8N461 479 aa20.92■□□□□ 0.94
SSB-201ENST00000260956 CNPY2Q9Y2B0 182 aa20.92■□□□□ 0.94
SSB-201ENST00000260956 BBOX1O75936 387 aa20.92■□□□□ 0.94
SSB-201ENST00000260956 PDIA4P13667 645 aaKnown RBP20.92■□□□□ 0.94
SSB-201ENST00000260956 HSP90B1P14625 803 aaKnown RBP20.92■□□□□ 0.94
SSB-201ENST00000260956 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
SSB-201ENST00000260956 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
SSB-201ENST00000260956 Q6ZUG5 572 aa20.92■□□□□ 0.94
SSB-201ENST00000260956 ATP6V0A2Q9Y487 856 aa20.92■□□□□ 0.94
SSB-201ENST00000260956 MROH5Q6ZUA9 1318 aa20.91■□□□□ 0.94
SSB-201ENST00000260956 E7EWF7 191 aa20.91■□□□□ 0.94
SSB-201ENST00000260956 HMGB1P09429 215 aaKnown RBP20.91■□□□□ 0.94
SSB-201ENST00000260956 DHX32Q7L7V1 743 aaKnown RBP20.91■□□□□ 0.94
SSB-201ENST00000260956 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
SSB-201ENST00000260956 MYH15Q9Y2K3 1946 aa20.91■□□□□ 0.94
SSB-201ENST00000260956 LRRFIP1Q32MZ4 808 aaKnown RBP20.9■□□□□ 0.94
SSB-201ENST00000260956 GORABQ5T7V8 394 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 PFKFB2O60825 505 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 PHKA1P46020 1223 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 PUM3Q15397 648 aaKnown RBP20.9■□□□□ 0.94
SSB-201ENST00000260956 CCDC93Q567U6 631 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 TTLL5Q6EMB2 1281 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 SMARCC2Q8TAQ2 1214 aa20.9■□□□□ 0.94
SSB-201ENST00000260956 PUS7LQ9H0K6 701 aaKnown RBP20.9■□□□□ 0.94
SSB-201ENST00000260956 PIH1D3Q9NQM4 214 aaKnown RBP20.9■□□□□ 0.94
SSB-201ENST00000260956 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
SSB-201ENST00000260956 ADD2P35612 726 aa20.89■□□□□ 0.93
SSB-201ENST00000260956 LRSAM1Q6UWE0 723 aa20.89■□□□□ 0.93
SSB-201ENST00000260956 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
SSB-201ENST00000260956 TIAM2Q8IVF5 1701 aa20.89■□□□□ 0.93
SSB-201ENST00000260956 FER1L6Q2WGJ9 1857 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 WTIPA6NIX2 430 aaPredicted RBP20.88■□□□□ 0.93
SSB-201ENST00000260956 EVCP57679 992 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 CCDC102BQ68D86 513 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 LPIN2Q92539 896 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 RBSNQ9H1K0 784 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
SSB-201ENST00000260956 SALL1Q9NSC2 1324 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 TCRBV5S4A2TA0A5A2 114 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 PDCP20941 246 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
SSB-201ENST00000260956 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
SSB-201ENST00000260956 FAM43AQ8N2R8 423 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 PPP1R9BQ96SB3 815 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 JAK2O60674 1132 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 SCRN1Q12765 414 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 C9orf131Q5VYM1 1079 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 BRF1Q92994 677 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 TAOK3Q9H2K8 898 aa20.87■□□□□ 0.93
SSB-201ENST00000260956 ZNF277Q9NRM2 450 aaPredicted RBP20.87■□□□□ 0.93
SSB-201ENST00000260956 CTDNEP1O95476 244 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
SSB-201ENST00000260956 UBE3CQ15386 1083 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 LARP1BQ659C4 914 aaKnown RBP20.86■□□□□ 0.93
SSB-201ENST00000260956 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 RTKN2Q8IZC4 609 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 LLPHQ9BRT6 129 aaKnown RBP20.86■□□□□ 0.93
SSB-201ENST00000260956 LRRC2Q9BYS8 371 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 NBPF3Q9H094 633 aa20.86■□□□□ 0.93
SSB-201ENST00000260956 LTBP3Q9NS15 1303 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 SYCE3A1L190 88 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 GPAA1O43292 621 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 UQCRFS1P1P0C7P4 283 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 UBE2HP62256 183 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 GPSM2P81274 684 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
SSB-201ENST00000260956 MB21D2Q8IYB1 491 aaPredicted RBP20.85■□□□□ 0.93
SSB-201ENST00000260956 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
SSB-201ENST00000260956 VPS37CA5D8V6 355 aaPredicted RBP20.84■□□□□ 0.93
SSB-201ENST00000260956 FGAP02671 866 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms