RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CYP27B1O15528 508 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ATP1A3P13637 1013 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 XBP1P17861 261 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 TSR1Q2NL82 804 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 KRT40Q6A162 431 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 BRAPQ7Z569 592 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 PLA2G4DQ86XP0 818 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 TRMT44Q8IYL2 757 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ZNF274Q96GC6 653 aaPredicted RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ANGEL1Q9UNK9 670 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 ZSCAN12O43309 604 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 RANBP6O60518 1105 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 GTF2F1P35269 517 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP44-201ENST00000258499 TNNT3P45378 269 aaPredicted RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 MYL5Q02045 173 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 PDIA6Q15084 440 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ZNF827Q17R98 1081 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 CCDC191Q8NCU4 936 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ANKRD20A12PQ8NF67 263 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 ERO1AQ96HE7 468 aa5.46□□□□□ -1.54
USP44-201ENST00000258499 GTPBP4Q9BZE4 634 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 PUS7LQ9H0K6 701 aaKnown RBP5.46□□□□□ -1.54
USP44-201ENST00000258499 hCG_1642624A0A1W2PR95 340 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 CCDC66A2RUB6 948 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 CASQ1P31415 396 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 FILIP1LQ4L180 1135 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 ATL3Q6DD88 541 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 MFSD6Q6ZSS7 791 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 LINC00301Q8NCQ3 95 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 SMARCE1Q969G3 411 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 KCNJ14Q9UNX9 436 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 ZNF609O15014 1411 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 MED23Q9ULK4 1368 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 ITGA6P23229 1130 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 DNAJC10Q8IXB1 793 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 SYNE4Q8N205 404 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 MAGEB6Q8N7X4 407 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 CCDC12Q8WUD4 166 aaPredicted RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 DHX58Q96C10 678 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 CARD6Q9BX69 1037 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 BRMS1Q9HCU9 246 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 LZTFL1Q9NQ48 299 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 POLR2DO15514 142 aaKnown RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 MBD4O95243 580 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 YEATS4O95619 227 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 NLRP12P59046 1061 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 CTDSPL2Q05D32 466 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 GPS2Q13227 327 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 BMS1Q14692 1282 aaKnown RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 IQCB1Q15051 598 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 KIF4BQ2VIQ3 1234 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 BICDL1Q6ZP65 573 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 NOL10Q9BSC4 688 aaKnown RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 DACH1Q9UI36 760 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 KCNH3Q9ULD8 1083 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 SNAP23O00161 211 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 IRS4O14654 1257 aaPredicted RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 CTDNEP1O95476 244 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 DMTNQ08495 405 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 WTAPQ15007 396 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 RTN1Q16799 776 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 WASF1Q92558 559 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 ZFP91Q96JP5 570 aaPredicted RBP5.45□□□□□ -1.54
USP44-201ENST00000258499 ARMT1Q9H993 441 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 INCENPQ9NQS7 918 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
USP44-201ENST00000258499 ZNF532Q9HCE3 1301 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 IPO7O95373 1038 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 ADKP55263 362 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 SCARF1Q14162 830 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 TTF1Q15361 905 aaPredicted RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 DIS3L2Q8IYB7 885 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 GOLGA6L1Q8N7Z2 621 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 SMARCC2Q8TAQ2 1214 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 STAMQ92783 540 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 KCNB2Q92953 911 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 NFE2L3Q9Y4A8 694 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 SLC4A4Q9Y6R1 1079 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 SPATA31D1Q6ZQQ2 1576 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 SH3TC1Q8TE82 1336 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 PXDNLA1KZ92 1463 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 RIMS1Q86UR5 1692 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 BTBD18B2RXH4 712 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 NBPF26B4DH59 902 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 DHX8Q14562 1220 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 TSGA10IPQ3SY00 556 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 NBPF14Q5TI25 921 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 USPL1Q5W0Q7 1092 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 NBPF10Q6P3W6 841 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 FBXO38Q6PIJ6 1188 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 NBPF15Q8N660 670 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 KRI1Q8N9T8 703 aaKnown RBP5.44□□□□□ -1.54
USP44-201ENST00000258499 DESI2Q9BSY9 194 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 CABP5Q9NP86 173 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 PCDHA5Q9Y5H7 936 aa5.44□□□□□ -1.54
USP44-201ENST00000258499 ANKRD26Q9UPS8 1709 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms