RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TAOK1Q7L7X3 1001 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 CROCCP2Q86T23 111 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC63Q8NA47 563 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 NAPGQ99747 312 aaPredicted RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 PAG1Q9NWQ8 432 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.4□□□□□ -1.549e-6■■■□□ 18.7
RC3H1-201ENST00000258349 KRBA2Q6ZNG9 492 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 LMNTD2Q8IXW0 634 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 PUS7Q96PZ0 661 aaKnown RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 GUCA1BQ9UMX6 200 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 TRPM1Q7Z4N2 1603 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 EEF2P13639 858 aaKnown RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 AFAP1L2Q8N4X5 818 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 ZMYM3Q14202 1370 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 RIMS2Q9UQ26 1411 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 IGHDP01880 384 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 PSMC4P43686 418 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 HAND2P61296 217 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC62Q6P9F0 684 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC186Q7Z3E2 898 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 RRP36Q96EU6 259 aaKnown RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 LLPHQ9BRT6 129 aaKnown RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 TXNDC16Q9P2K2 825 aa5.4□□□□□ -1.54
RC3H1-201ENST00000258349 PPP1R1BQ9UD71 204 aaPredicted RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 POLR3AO14802 1390 aaPredicted RBP5.4□□□□□ -1.54
RC3H1-201ENST00000258349 FAM13AO94988 1023 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 PLCG2P16885 1265 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 NAA25Q14CX7 972 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 VCXQ9H320 206 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 VCX3BQ9H321 246 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 CTNND2Q9UQB3 1225 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 USH1CQ9Y6N9 552 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 RAD50Q92878 1312 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 ATP7AQ04656 1500 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 ZNF569Q5MCW4 686 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 IFT81Q8WYA0 676 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 IFNKQ9P0W0 207 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 LUC7L2Q9Y383 392 aaKnown RBP5.4□□□□□ -1.55
RC3H1-201ENST00000258349 RBM8AQ9Y5S9 174 aaKnown RBP5.4□□□□□ -1.55
RC3H1-201ENST00000258349 NPHP3Q7Z494 1330 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 TTC37Q6PGP7 1564 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 TMEM110-MUSTN1A8MSY1 372 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 NAPAP54920 295 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 MIPOL1Q8TD10 442 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 C6orf50Q9HD87 102 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 TTF2Q9UNY4 1162 aaKnown RBP5.4□□□□□ -1.55
RC3H1-201ENST00000258349 NUMA1Q14980 2115 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 B4DLN1 442 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 PHACTR2O75167 634 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 CNGA1P29973 690 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 GNA11P29992 359 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 MRPL12P52815 198 aaKnown RBP5.4□□□□□ -1.55
RC3H1-201ENST00000258349 FAM160A1Q05DH4 1040 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 CEP85LQ5SZL2 805 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 CNNM4Q6P4Q7 775 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 MPRIPQ6WCQ1 1025 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 MARCKSP29966 332 aaPredicted RBP5.4□□□□□ -1.55
RC3H1-201ENST00000258349 C8orf34Q49A92 452 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 SH2D4BQ5SQS7 431 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 TSHZ3Q63HK5 1081 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 ANKRD44Q8N8A2 993 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 IQCDQ96DY2 449 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 DACT1Q9NYF0 836 aa5.4□□□□□ -1.55
RC3H1-201ENST00000258349 ACTN4O43707 911 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SNRPA1P09661 255 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 EPB41P11171 864 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SH3BGRP55822 239 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 ZNF804AQ7Z570 1209 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 PHLDB2Q86SQ0 1253 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 ARHGAP24Q8N264 748 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SMC1BQ8NDV3 1235 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 TSKSQ9UJT2 592 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 NPATQ14207 1427 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GON4LQ3T8J9 2241 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GOLGA6CA6NDK9 693 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GRM8O00222 908 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RHOXF2BP0C7M4 288 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GOLGA6DP0CG33 693 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SNX16P57768 344 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RAB3IPQ96QF0 476 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RHOXF2Q9BQY4 288 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GOLGA6AQ9NYA3 693 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 MAP3K5Q99683 1374 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 LMOD1P29536 600 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RPL13P26373 211 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 TPD52P55327 224 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 MYRIPQ8NFW9 859 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 NOX5Q96PH1 765 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 LARP6Q9BRS8 491 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RNF216Q9NWF9 866 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 DENND4BO75064 1496 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SPDYE3A6NKU9 549 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 CCDC122Q5T0U0 273 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 NAP1L4Q99733 375 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 PANK2Q9BZ23 570 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 CABP5Q9NP86 173 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 LZTFL1Q9NQ48 299 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 SERPINA10Q9UK55 444 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 ATP6V0A2Q9Y487 856 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms