RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LZTFL1Q9NQ48 299 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
SGPP1-201ENST00000247225 SNAP23O00161 211 aa19.47■□□□□ 0.71
SGPP1-201ENST00000247225 ZMYM1Q5SVZ6 1142 aa19.47■□□□□ 0.71
SGPP1-201ENST00000247225 SLC26A6Q9BXS9 759 aa19.47■□□□□ 0.71
SGPP1-201ENST00000247225 IRX2Q9BZI1 471 aaPredicted RBP19.47■□□□□ 0.71
SGPP1-201ENST00000247225 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 METAP2P50579 478 aaKnown RBP eCLIP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 BMS1Q14692 1282 aaKnown RBP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 RTEL1Q9NZ71 1219 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 KCNJ14Q9UNX9 436 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 EVCP57679 992 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 XAGE2Q96GT9 111 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 PUF60Q9UHX1 559 aaKnown RBP19.46■□□□□ 0.71
SGPP1-201ENST00000247225 PHKG2P15735 406 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 NLRP12P59046 1061 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 SLC9C2Q5TAH2 1124 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 ATG9AQ7Z3C6 839 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 VPS37DQ86XT2 251 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 NKX2-3Q8TAU0 364 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 STAMQ92783 540 aa19.46■□□□□ 0.71
SGPP1-201ENST00000247225 PES1O00541 588 aaKnown RBP19.45■□□□□ 0.7
SGPP1-201ENST00000247225 CCDC150Q8NCX0 1101 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 HELLSQ9NRZ9 838 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 EYA2O00167 538 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 GPAA1O43292 621 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
SGPP1-201ENST00000247225 LONRF3Q496Y0 759 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 METTL24Q5JXM2 366 aa19.45■□□□□ 0.7
SGPP1-201ENST00000247225 MROH7-TTC4A0A0A0MT08 1334 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 CASP1P29466 404 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 AFMP43652 599 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 ETF1P62495 437 aaKnown RBP19.44■□□□□ 0.7
SGPP1-201ENST00000247225 GABPB1Q06547 395 aaPredicted RBP19.44■□□□□ 0.7
SGPP1-201ENST00000247225 KRT40Q6A162 431 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 DSCC1Q9BVC3 393 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 ARGLU1Q9NWB6 273 aaPredicted RBP19.44■□□□□ 0.7
SGPP1-201ENST00000247225 AKAP12Q02952 1782 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 CNNM1Q9NRU3 951 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 IQSEC3Q9UPP2 1182 aaPredicted RBP19.44■□□□□ 0.7
SGPP1-201ENST00000247225 PCDHA5Q9Y5H7 936 aa19.44■□□□□ 0.7
SGPP1-201ENST00000247225 CYP27B1O15528 508 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 IL15P40933 162 aaPredicted RBP19.43■□□□□ 0.7
SGPP1-201ENST00000247225 ANKLE2Q86XL3 938 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 ZNF274Q96GC6 653 aaPredicted RBP19.43■□□□□ 0.7
SGPP1-201ENST00000247225 STRN4Q9NRL3 753 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 DIP2BQ9P265 1576 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 MCM6Q14566 821 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
SGPP1-201ENST00000247225 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
SGPP1-201ENST00000247225 ALDH8A1Q9H2A2 487 aaPredicted RBP19.43■□□□□ 0.7
SGPP1-201ENST00000247225 CASQ1P31415 396 aa19.42■□□□□ 0.7
SGPP1-201ENST00000247225 KIF23Q02241 960 aaPredicted RBP19.42■□□□□ 0.7
SGPP1-201ENST00000247225 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
SGPP1-201ENST00000247225 CCDC66A2RUB6 948 aa19.42■□□□□ 0.7
SGPP1-201ENST00000247225 PNMA6AP0CW24 399 aaPredicted RBP19.42■□□□□ 0.7
SGPP1-201ENST00000247225 FOXO4P98177 505 aa19.42■□□□□ 0.7
SGPP1-201ENST00000247225 GRIN1Q05586 938 aa19.42■□□□□ 0.7
SGPP1-201ENST00000247225 CCDC12Q8WUD4 166 aaPredicted RBP19.42■□□□□ 0.7
SGPP1-201ENST00000247225 TFRCP02786 760 aaKnown RBP19.41■□□□□ 0.7
SGPP1-201ENST00000247225 MYL5Q02045 173 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 CTDSPL2Q05D32 466 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 MTF1Q14872 753 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 WDR24Q96S15 920 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 GOLGA8AA7E2F4 631 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 PHACTR2O75167 634 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 IARSP41252 1262 aaKnown RBP19.41■□□□□ 0.7
SGPP1-201ENST00000247225 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 FAM208AQ9UK61 1670 aaKnown RBP19.41■□□□□ 0.7
SGPP1-201ENST00000247225 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
SGPP1-201ENST00000247225 PDE4BQ07343 736 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 HINFPQ9BQA5 517 aa19.41■□□□□ 0.7
SGPP1-201ENST00000247225 BTBD18B2RXH4 712 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 CDC27P30260 824 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 NCAPHQ15003 741 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 TMEM67Q5HYA8 995 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 SHC4Q6S5L8 630 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 UTYO14607 1347 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 SETD1AO15047 1707 aaKnown RBP19.4■□□□□ 0.7
SGPP1-201ENST00000247225 KIF2AO00139 706 aaPredicted RBP19.4■□□□□ 0.7
SGPP1-201ENST00000247225 IFIT3O14879 490 aaKnown RBP19.4■□□□□ 0.7
SGPP1-201ENST00000247225 ANTXR2P58335 489 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 KCNH3Q9ULD8 1083 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 HPS5Q9UPZ3 1129 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 NFE2L3Q9Y4A8 694 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 TOGARAM2Q6ZUX3 1019 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
SGPP1-201ENST00000247225 OSBPL5Q9H0X9 879 aaPredicted RBP19.4■□□□□ 0.7
SGPP1-201ENST00000247225 MTMR7Q9Y216 660 aa19.4■□□□□ 0.7
SGPP1-201ENST00000247225 ST5P78524 1137 aa19.39■□□□□ 0.69
SGPP1-201ENST00000247225 CYB5R4Q7L1T6 521 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms