RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ST8SIA5O15466 376 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 SOX15O60248 233 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
GPC3-204ENST00000631057 ZG16O60844 167 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 TNFSF13O75888 250 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 CGAP01215 116 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 OPN1MWP04001 364 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 CXCL1P09341 107 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 OPN1MW2P0DN77 364 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 OPN1MW3P0DN78 364 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 HOXA5P20719 270 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 CFHR2P36980 270 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 KIR2DS2P43631 304 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 GNB2P62879 340 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 RPP30P78346 268 aaKnown RBP6.72□□□□□ -1.33
GPC3-204ENST00000631057 CTAG1AP78358 180 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 MEF2BQ02080 365 aaPredicted RBP6.72□□□□□ -1.33
GPC3-204ENST00000631057 EDDM3AQ14507 147 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 DEFB109BQ30KR1 87 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 AARDQ4LEZ3 155 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 FFAR4Q5NUL3 377 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 ZNF343Q6P1L6 599 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 ACSM6Q6P461 480 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 IGF2-ASQ6U949 168 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 ZADH2Q8N4Q0 377 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 RPP25LQ8N5L8 163 aaKnown RBP6.72□□□□□ -1.33
GPC3-204ENST00000631057 OR2Z1Q8NG97 314 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 OR10G9Q8NGN4 311 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 MBD3L2Q8NHZ7 208 aaPredicted RBP6.72□□□□□ -1.33
GPC3-204ENST00000631057 RFESDQ8TAC1 157 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 NANPQ8TBE9 248 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 R3HDM4Q96D70 268 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 STARD4Q96DR4 205 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 SNX22Q96L94 193 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 RAB9BQ9NP90 201 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 GNG12Q9UBI6 72 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 SLC25A15Q9Y619 301 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 URGCP-MRPS24S4R325 110 aa6.72□□□□□ -1.33
GPC3-204ENST00000631057 ICE1Q9Y2F5 2266 aa6.71□□□□□ -1.33
GPC3-204ENST00000631057 CELSR3Q9NYQ7 3312 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 TGIF2-C20orf24A0A0A6YYL0 155 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 SPAARA0A1B0GVQ0 90 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 CYB5BO43169 146 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 RBFOX2O43251 390 aaKnown RBP eCLIP6.71□□□□□ -1.344e-7■■■■□ 23.1
GPC3-204ENST00000631057 YPEL1O60688 119 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 CLN5O75503 358 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 CEACAM4O75871 244 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 WISP2O76076 250 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 KBTBD11O94819 623 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 TFF1P04155 84 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 EGR1P18146 543 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 ERVK-16P61578 105 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 B2MP61769 119 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 ACOT6Q3I5F7 207 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 C3orf36Q3SXR2 165 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 WDR25Q64LD2 544 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 FAM53AQ6NSI3 398 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 CYP2G1PQ6ZSU1 146 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 SLC16A13Q7RTY0 426 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 TPRX1Q8N7U7 411 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 FAM210BQ96KR6 192 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 YPEL2Q96QA6 119 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 NPCDR1Q9BY65 106 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 NCOR1P1Q9H4R4 102 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 SLC25A22Q9H936 323 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 DKK4Q9UBT3 224 aa6.71□□□□□ -1.34
GPC3-204ENST00000631057 YLPM1P49750 1951 aaKnown RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 EP300Q09472 2414 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 RAI1Q7Z5J4 1906 aaPredicted RBP6.71□□□□□ -1.34
GPC3-204ENST00000631057 FRYQ5TBA9 3013 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 TRBV24-1A0A075B6N3 115 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 IGKV1D-17A0A075B6S4 117 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
GPC3-204ENST00000631057 C15orf62A8K5M9 175 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 PRSS47A8MTI9 375 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 DEFB108AA8MXU0 73 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 F2RL2O00254 374 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 FCGR3BO75015 233 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 HPRT1P00492 218 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 IGKV1D-33P01593 117 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 IGKV1-33P01594 117 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 IGHV3-13P01766 116 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 CD55P08174 381 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 DUTP33316 252 aaKnown RBP6.7□□□□□ -1.34
GPC3-204ENST00000631057 CDX1P47902 265 aaPredicted RBP6.7□□□□□ -1.34
GPC3-204ENST00000631057 NDUFA6P56556 154 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 KLF3P57682 345 aaPredicted RBP6.7□□□□□ -1.34
GPC3-204ENST00000631057 CD81P60033 236 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 SPCS3P61009 180 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 HOXA4Q00056 320 aaPredicted RBP6.7□□□□□ -1.34
GPC3-204ENST00000631057 TFF3Q07654 80 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 TMEM241Q24JQ0 296 aa6.7□□□□□ -1.34
GPC3-204ENST00000631057 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms