RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SCN3BQ9NY72 215 aa14.41□□□□□ -0.1
SMN2-215ENST00000628696 RBMXL2O75526 392 aaKnown RBP14.4□□□□□ -0.1
SMN2-215ENST00000628696 BRI3O95415 125 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 GSTT2P0CG29 244 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 GSTT2BP0CG30 244 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 RPS25P62851 125 aaKnown RBP14.4□□□□□ -0.1
SMN2-215ENST00000628696 TNXAQ16473 311 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 TMEM177Q53S58 311 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 FAM110AQ9BQ89 295 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 SIGLEC8Q9NYZ4 499 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 PEMTQ9UBM1 199 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 BIRC6Q9NR09 4857 aa14.4□□□□□ -0.1
SMN2-215ENST00000628696 SHISA3A0PJX4 238 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 ARL6IP5O75915 188 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 OR2A4O95047 310 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 PRH1P02810 166 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 OR9G9P0C7N8 305 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 CD81P60033 236 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
SMN2-215ENST00000628696 VMA21Q3ZAQ7 101 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 OGFRL1Q5TC84 451 aaPredicted RBP14.39□□□□□ -0.11
SMN2-215ENST00000628696 ADAD2Q8NCV1 583 aaKnown RBP14.39□□□□□ -0.11
SMN2-215ENST00000628696 ACOT12Q8WYK0 555 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 MAFIPQ8WZ33 124 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 C5orf30Q96GV9 206 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 CEPT1Q9Y6K0 416 aa14.39□□□□□ -0.11
SMN2-215ENST00000628696 A0A075B6Q4 140 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 TMEM272A0A1B0GTI8 110 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 JTBO76095 146 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 RRASP10301 218 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 CALRP27797 417 aaKnown RBP14.38□□□□□ -0.11
SMN2-215ENST00000628696 RHOGP84095 191 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 ATP5G2Q06055 141 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 PLA2G7Q13093 441 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 PRSS8Q16651 343 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 MRGPRG-AS1Q2M3A8 158 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 HES5Q5TA89 166 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 IDO2Q6ZQW0 420 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 TEX45Q8NA69 505 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 SRSF12Q8WXF0 261 aaKnown RBP14.38□□□□□ -0.11
SMN2-215ENST00000628696 RAB3CQ96E17 227 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 GINS4Q9BRT9 223 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 AKIP1Q9NQ31 210 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 RAB22AQ9UL26 194 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
SMN2-215ENST00000628696 TRBV6-7A0A0A0MS04 114 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 TPPPO94811 219 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 CRYZL1O95825 349 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 FCGR3AP08637 254 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 MECP2P51608 486 aaKnown RBP14.37□□□□□ -0.11
SMN2-215ENST00000628696 UBE2KP61086 200 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 TPBGQ13641 420 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 EXOSC2Q13868 293 aaKnown RBP14.37□□□□□ -0.11
SMN2-215ENST00000628696 IRF3Q14653 427 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 TRAM1Q15629 374 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 IL17DQ8TAD2 202 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 NEURL2Q9BR09 285 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 CABLES2Q9BTV7 478 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 HIPK2Q9H2X6 1198 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 VCXQ9H320 206 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 ZNF230Q9UIE0 474 aaPredicted RBP14.37□□□□□ -0.11
SMN2-215ENST00000628696 V9GY05 133 aa14.37□□□□□ -0.11
SMN2-215ENST00000628696 BMPR1BO00238 502 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 AIREO43918 545 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 RANBP1P43487 201 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 CD300EQ496F6 205 aaPredicted RBP14.36□□□□□ -0.11
SMN2-215ENST00000628696 OR2K2Q8NGT1 345 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 DYNLRB2Q8TF09 96 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 ADTRPQ96IZ2 230 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 SLC2A8Q9NY64 477 aa14.36□□□□□ -0.11
SMN2-215ENST00000628696 FAM223BA6NKX1 122 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 TUSC2O75896 110 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 ACTL6BO94805 426 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 GNB3P16520 340 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 DUTP33316 252 aaKnown RBP14.35□□□□□ -0.11
SMN2-215ENST00000628696 ZNF45Q02386 682 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 GUCA2BQ16661 112 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 FAM223AQ8IWN6 122 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 DEFB125Q8N687 156 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
SMN2-215ENST00000628696 LINC00473A8K010 186 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 ZNF785A8K8V0 405 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 J3QRK9 145 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 CASQ2O14958 399 aaPredicted RBP14.34□□□□□ -0.11
SMN2-215ENST00000628696 CD7P09564 240 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 GADD45AP24522 165 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 PSMA1P25786 263 aaKnown RBP14.34□□□□□ -0.11
SMN2-215ENST00000628696 TALDO1P37837 337 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 PSMD7P51665 324 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 FABP5Q01469 135 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 LINC00322Q6ZN03 302 aaPredicted RBP14.34□□□□□ -0.11
SMN2-215ENST00000628696 OR10R2Q8NGX6 335 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 DDB2Q92466 427 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 CCDC90BQ9GZT6 254 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 TPRKBQ9Y3C4 175 aa14.34□□□□□ -0.11
SMN2-215ENST00000628696 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
SMN2-215ENST00000628696 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
SMN2-215ENST00000628696 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
SMN2-215ENST00000628696 ARFRP1Q13795 201 aa14.33□□□□□ -0.12
SMN2-215ENST00000628696 LAX1Q8IWV1 398 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms