RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 KIR2DL2P43627 348 aaPredicted RBP13.47□□□□□ -0.25
RTN1-209ENST00000611068 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
RTN1-209ENST00000611068 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
RTN1-209ENST00000611068 OR51I2Q9H344 312 aa13.47□□□□□ -0.25
RTN1-209ENST00000611068 DKK4Q9UBT3 224 aa13.47□□□□□ -0.25
RTN1-209ENST00000611068 C3orf80F5H4A9 247 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 NDUFS8O00217 210 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TYMSP04818 313 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TNFSF4P23510 183 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 IL3RAP26951 378 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 DYNLT3P51808 116 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 PIGPP57054 158 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TMEM187Q14656 261 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TMEM41BQ5BJD5 291 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 ZNF787Q6DD87 383 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 OR1K1Q8NGR3 316 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TMEM56Q96MV1 263 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 CLN8Q9UBY8 286 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TMEM56-RWDD3S4R434 201 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 ZGRF1Q86YA3 2104 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 NBASA2RRP1 2371 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 IGHV3-64DA0A0J9YX35 117 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 IGLV3-1P01715 115 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 CTSDP07339 412 aaPredicted RBP13.46□□□□□ -0.25
RTN1-209ENST00000611068 ARR3P36575 388 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 PLA2G5P39877 138 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TPPP2P59282 170 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 ACSF3Q4G176 576 aaPredicted RBP13.46□□□□□ -0.25
RTN1-209ENST00000611068 PRR30Q53SZ7 412 aaPredicted RBP13.46□□□□□ -0.25
RTN1-209ENST00000611068 IGFL3Q6UXB1 125 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 TCF23Q7RTU1 214 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 Q8N976 141 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 OR4B1Q8NGF8 309 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 PINX1Q96BK5 328 aaKnown RBP13.46□□□□□ -0.25
RTN1-209ENST00000611068 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 LIME1Q9H400 295 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 VSIRQ9H7M9 311 aa13.46□□□□□ -0.25
RTN1-209ENST00000611068 KALRNO60229 2985 aa13.46□□□□□ -0.26
RTN1-209ENST00000611068 MTCP1P56278 107 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 GNMTQ14749 295 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 CRIP3Q6Q6R5 217 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 CYP2G1PQ6ZSU1 146 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 FBXL7Q9UJT9 491 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
RTN1-209ENST00000611068 SH2D1BO14796 132 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 CTXN2P0C2S0 81 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 DUSP1P28562 367 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 TAS2R46P59540 309 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 PDCD1Q15116 288 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 ZNF726P1Q15940 193 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 TBR1Q16650 682 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 SEM1Q6ZVN7 128 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 OR56B2PQ8NGI1 322 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 PLPPR1Q8TBJ4 325 aa13.45□□□□□ -0.26
RTN1-209ENST00000611068 IGKV1-27A0A075B6S5 117 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 SS18L1O75177 396 aaPredicted RBP13.44□□□□□ -0.26
RTN1-209ENST00000611068 SERF1AO75920 110 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 ADMP35318 185 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 FFAR4Q5NUL3 377 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 TMEM252Q8N6L7 170 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 C1orf147Q96MC9 270 aaPredicted RBP13.44□□□□□ -0.26
RTN1-209ENST00000611068 C11orf1Q9H5F2 150 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 SLC2A9Q9NRM0 540 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 LYRM2Q9NU23 88 aaPredicted RBP13.44□□□□□ -0.26
RTN1-209ENST00000611068 MSRB2Q9Y3D2 182 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 PIEZO1Q92508 2521 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 WDR1O75083 606 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 KRTDAPP60985 99 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 SUMO1P63165 101 aaKnown RBP13.44□□□□□ -0.26
RTN1-209ENST00000611068 PLP2Q04941 152 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 SMIM12Q96EX1 92 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 NUDT16L1Q9BRJ7 211 aaKnown RBP13.44□□□□□ -0.26
RTN1-209ENST00000611068 PLK3Q9H4B4 646 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 RPRMQ9NS64 109 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
RTN1-209ENST00000611068 TRAV1-1A0A0B4J248 108 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 F2Z2F3 143 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 BMP5P22003 454 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 NKX2-1P43699 371 aaPredicted RBP13.43□□□□□ -0.26
RTN1-209ENST00000611068 PHLDA2Q53GA4 152 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 C1orf174Q8IYL3 243 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 GNPNAT1Q96EK6 184 aaPredicted RBP13.43□□□□□ -0.26
RTN1-209ENST00000611068 C18orf12Q96KH6 178 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 BET1LQ9NYM9 111 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 A0A0U1RQK1 487 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 ODAMA1E959 279 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 SAP30O75446 220 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 NRASP01111 189 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 CFAP161Q6P656 301 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 FAM180AQ6UWF9 173 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 OR5AU1Q8NGC0 362 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 ZNF596Q8TC21 504 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 ATP5SQ99766 215 aa13.43□□□□□ -0.26
RTN1-209ENST00000611068 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
RTN1-209ENST00000611068 TMEM59Q9BXS4 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms