RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 HAGHQ16775 308 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 TEX36Q5VZQ5 186 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 SSX8Q7RTT4 187 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 TCF23Q7RTU1 214 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
NEK3-205ENST00000610828 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
NEK3-205ENST00000610828 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 RPRMQ9NS64 109 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 KIAA1456Q9P272 454 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 A0A1B0GW64 132 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 PPIHO43447 177 aaKnown RBP11.25□□□□□ -0.61
NEK3-205ENST00000610828 IFNA17P01571 189 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 NDUFB7P17568 137 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 RAB2AP61019 212 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 C1orf229Q6ZS94 237 aaPredicted RBP11.25□□□□□ -0.61
NEK3-205ENST00000610828 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 PSMG3Q9BT73 122 aaPredicted RBP11.25□□□□□ -0.61
NEK3-205ENST00000610828 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
NEK3-205ENST00000610828 HCFC1P51610 2035 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 SAA2-SAA4A0A096LPE2 208 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
NEK3-205ENST00000610828 GNG10P50151 68 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
NEK3-205ENST00000610828 NGBQ9NPG2 151 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 NKX6-3A6NJ46 265 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 VSTM5A8MXK1 200 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 HBE1P02100 147 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 AKR1C3P42330 323 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 ERVK-16P61578 105 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 LYG1Q8N1E2 194 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 OR10P1Q8NGE3 313 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 OR4A16Q8NH70 328 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 CCL17Q92583 94 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 C20orf24Q9BUV8 137 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 EGLN1Q9GZT9 426 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
NEK3-205ENST00000610828 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
NEK3-205ENST00000610828 IGF2RP11717 2491 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 M0R036 132 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEK3-205ENST00000610828 TSPAN9O75954 239 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 SERF2P84101 59 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 RBMXL1Q96E39 390 aaKnown RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 SMDT1Q9H4I9 107 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 RPS10P5Q9NQ39 176 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 MMP23AO75900 390 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 NQO2P16083 231 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 CEBPGP53567 150 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 HFEQ30201 348 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 NEUROG1Q92886 237 aa11.23□□□□□ -0.61
NEK3-205ENST00000610828 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 PARD6GQ9BYG4 376 aaPredicted RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
NEK3-205ENST00000610828 SPTA1P02549 2419 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 ZZEF1O43149 2961 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 PMS2P5A8MQ11 134 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 H7C2Y5 167 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 MRPS11P82912 194 aaKnown RBP11.22□□□□□ -0.61
NEK3-205ENST00000610828 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 DDB2Q92466 427 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 HIPK2Q9H2X6 1198 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
NEK3-205ENST00000610828 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 UCNP55089 124 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 ZNF726P1Q15940 193 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.61
NEK3-205ENST00000610828 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 CLDND2Q8NHS1 167 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.61
NEK3-205ENST00000610828 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 ZMAT5Q9UDW3 170 aaKnown RBP11.21□□□□□ -0.61
NEK3-205ENST00000610828 GAB2Q9UQC2 676 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 POLEQ07864 2286 aa11.21□□□□□ -0.61
NEK3-205ENST00000610828 PPIAL4EA0A075B759 164 aa11.21□□□□□ -0.62
NEK3-205ENST00000610828 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms