RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RELBQ01201 579 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 MMDQ15546 238 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 FAM71E2Q8N5Q1 922 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 OR4C16Q8NGL9 310 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 RASL11BQ9BPW5 248 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 FXYD6Q9H0Q3 95 aa13.19□□□□□ -0.3
SHKBP1-219ENST00000599575 NAP1L6A6NFF2 107 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 IGKV1-16P04430 117 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 AMY1AP04745 511 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 PPP5CP53041 499 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 Q8N9W7 124 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 LINC01006Q8NI28 216 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 TCTEX1D2Q8WW35 142 aa13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 C7orf50Q9BRJ6 194 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-219ENST00000599575 KCNAB3O43448 404 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 PGLYRP1O75594 196 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 RND3P61587 244 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 BLCAPP62952 87 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 C5orf64Q2M2E5 130 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 SCGB2B2Q4G0G5 96 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 ZNF702PQ9H963 129 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SHKBP1-219ENST00000599575 CENPXA8MT69 81 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 RRHO14718 337 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 SHOXO15266 292 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 FCGR3BO75015 233 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 IGHG2P01859 326 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 F2RL1P55085 397 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 BAK1Q16611 211 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 FBLN7Q53RD9 439 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 ZNF57Q68EA5 555 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 IDO2Q6ZQW0 420 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 OR51S1Q8NGJ8 323 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 HRASLSQ9HDD0 168 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 SLC2A9Q9NRM0 540 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 MCUBQ9NWR8 336 aa13.16□□□□□ -0.3
SHKBP1-219ENST00000599575 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 CRYZL1O95825 349 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 HPRT1P00492 218 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 HRASP01112 189 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 IL7P13232 177 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 PGAM2P15259 253 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 F2RP25116 425 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 LINC00205P59089 165 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 UBE2KP61086 200 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 PSG5Q15238 335 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 VMA21Q3ZAQ7 101 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 LIN54Q6MZP7 749 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 SPAG16Q8N0X2 631 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 CADM3Q8N126 398 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 TEX45Q8NA69 505 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 GON7Q9BXV9 100 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 C14orf166Q9Y224 244 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 RNF114Q9Y508 228 aa13.15□□□□□ -0.3
SHKBP1-219ENST00000599575 TNFSF12O43508 249 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 FGF2P09038 288 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 TAS2R31P59538 309 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 FAAP20Q6NZ36 180 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 C12orf54Q6X4T0 127 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 FOXRED2Q8IWF2 684 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 RITA1Q96K30 269 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 MDFIQ99750 246 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 COMMD9Q9P000 198 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 GPR132Q9UNW8 380 aa13.14□□□□□ -0.31
SHKBP1-219ENST00000599575 AP4M1O00189 453 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 MPPED1O15442 326 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 PEX14O75381 377 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 RLN1P04808 185 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 RPA2P15927 270 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 PROK1P58294 105 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 PLGLAQ15195 96 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 ZNF562Q6V9R5 426 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 SLC35E3Q7Z769 313 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 PPP1R27Q86WC6 154 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 OR13C8Q8NGS7 320 aa13.13□□□□□ -0.31
SHKBP1-219ENST00000599575 OR51H1Q8NH63 302 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms