RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 MFSD4AQ8N468 514 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
UPF1-202ENST00000594243 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
UPF1-202ENST00000594243 DCUN1D5Q9BTE7 237 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 ZFP57Q9NU63 452 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 MGAM2Q2M2H8 2515 aa11.83□□□□□ -0.52
UPF1-202ENST00000594243 FCN1O00602 326 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 SLC25A17O43808 307 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 FCGR3BO75015 233 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 TSPAN15O95858 294 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 CX3CL1P78423 397 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 ACTBL2Q562R1 376 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 PPP1R27Q86WC6 154 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 OR4F17Q8NGA8 305 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 OR4F4Q96R69 305 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 CLCC1Q96S66 551 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 NXF2Q9GZY0 626 aaKnown RBP11.82□□□□□ -0.52
UPF1-202ENST00000594243 RBM38Q9H0Z9 239 aaKnown RBP11.82□□□□□ -0.52
UPF1-202ENST00000594243 PARP11Q9NR21 331 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 KLK11Q9UBX7 282 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 MTFP1Q9UDX5 166 aa11.82□□□□□ -0.52
UPF1-202ENST00000594243 TET2Q6N021 2002 aaPredicted RBP11.82□□□□□ -0.52
UPF1-202ENST00000594243 GABARAPH6UMI1 98 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 ATP6V0E1O15342 81 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 CRYZL1O95825 349 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 ELANEP08246 267 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
UPF1-202ENST00000594243 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
UPF1-202ENST00000594243 CATR1Q13166 79 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
UPF1-202ENST00000594243 IL18Q14116 193 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 LPCAT3Q6P1A2 487 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 OR52I2Q8NH67 350 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
UPF1-202ENST00000594243 MOB3AQ96BX8 217 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
UPF1-202ENST00000594243 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
UPF1-202ENST00000594243 ADARB2-AS1A8MUL3 147 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 TNFSF12O43508 249 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 CA2P00918 260 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 IGHG4P01861 327 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 IFNA6P05013 189 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 CRYGBP07316 175 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 GNRHRP30968 328 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 UBE2KP61086 200 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 CFHR3Q02985 330 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 SSBP1Q04837 148 aaKnown RBP11.8□□□□□ -0.52
UPF1-202ENST00000594243 FOXE3Q13461 319 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 RNASE12Q5GAN4 147 aaKnown RBP11.8□□□□□ -0.52
UPF1-202ENST00000594243 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
UPF1-202ENST00000594243 VAX1Q5SQQ9 334 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 OR4S2Q8NH73 311 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 NDUFA13Q9P0J0 144 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
UPF1-202ENST00000594243 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 CTDSPLO15194 276 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 CNIH1O95406 144 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 TBPP20226 339 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
UPF1-202ENST00000594243 SLC6A1P30531 599 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 TNFSF8P32971 234 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
UPF1-202ENST00000594243 FXYD3Q14802 87 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 RNASE10Q5GAN6 216 aaKnown RBP11.79□□□□□ -0.52
UPF1-202ENST00000594243 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 CMTM1Q8IZ96 169 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 TCTEX1D1Q8N7M0 179 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 ABHD5Q8WTS1 349 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 NUBP2Q9Y5Y2 271 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 A3GALT2U3KPV4 340 aa11.79□□□□□ -0.52
UPF1-202ENST00000594243 FABP12A6NFH5 140 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 G3V318 75 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 CREBL2O60519 120 aaPredicted RBP11.78□□□□□ -0.52
UPF1-202ENST00000594243 CD3DP04234 171 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 PF4V1P10720 104 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 S100GP29377 79 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 S100A5P33763 92 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 TAS2R19P59542 299 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
UPF1-202ENST00000594243 AKIRIN2Q53H80 203 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 TMEM65Q6PI78 240 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
UPF1-202ENST00000594243 ARRDC1Q8N5I2 433 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms