RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
CIRBP-243ENST00000593128 SHISA3A0PJX4 238 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 IFITM5A6NNB3 132 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 H3BUA1 57 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 MFNGO00587 321 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 CRYZL1O95825 349 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 HIST1H1DP16402 221 aaKnown RBP13.75□□□□□ -0.21
CIRBP-243ENST00000593128 RAB3BP20337 219 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 SYNJ2BPP57105 145 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-243ENST00000593128 TBCEQ15813 527 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-243ENST00000593128 TNXAQ16473 311 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 C22orf42Q6IC83 251 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 IDO2Q6ZQW0 420 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 ACOT12Q8WYK0 555 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 BLOC1S6Q9UL45 172 aa13.75□□□□□ -0.21
CIRBP-243ENST00000593128 METTL21EPA6NDL7 271 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 MSGN1A6NI15 193 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 SRRM4A7MD48 611 aaKnown RBP13.74□□□□□ -0.21
CIRBP-243ENST00000593128 CRYGBP07316 175 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 VMA21Q3ZAQ7 101 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 SGPP2Q8IWX5 399 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 ADAM30Q9UKF2 790 aa13.74□□□□□ -0.21
CIRBP-243ENST00000593128 ELF5Q9UKW6 265 aaPredicted RBP13.74□□□□□ -0.21
CIRBP-243ENST00000593128 TRAV1-2A0A0B4J238 106 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 RRASP10301 218 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 RAB6AP20340 208 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 TAGLNQ01995 201 aaKnown RBP13.73□□□□□ -0.21
CIRBP-243ENST00000593128 TMEM177Q53S58 311 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 ST6GALNAC5Q9BVH7 336 aa13.73□□□□□ -0.21
CIRBP-243ENST00000593128 TINAGL1Q9GZM7 467 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-243ENST00000593128 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
CIRBP-243ENST00000593128 IGKV1D-8A0A087WSZ0 117 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 RAB27BO00194 218 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 ATP6V1G2O95670 118 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 PRH1P02810 166 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 AADACP22760 399 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 HSPA13P48723 471 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 RPEL1Q2QD12 228 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 ADTRPQ96IZ2 230 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 TMEM68Q96MH6 324 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 NDUFB11Q9NX14 153 aa13.72□□□□□ -0.21
CIRBP-243ENST00000593128 LINC00473A8K010 186 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 TUSC2O75896 110 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 ACTL6BO94805 426 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 LYL1P12980 280 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
CIRBP-243ENST00000593128 UBE2KP61086 200 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 DYRK1AQ13627 763 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 KLF5Q13887 457 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-243ENST00000593128 PRSS8Q16651 343 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 TATDN3Q17R31 274 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 CASC10Q5T4H9 136 aa13.71□□□□□ -0.21
CIRBP-243ENST00000593128 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-243ENST00000593128 DNAH7Q8WXX0 4024 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 TRDV1A0A1B0GX56 115 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 FCGR3BO75015 233 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-243ENST00000593128 CDNFQ49AH0 187 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 ZFAND6Q6FIF0 208 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 Q8N1Y9 231 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 TEX45Q8NA69 505 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 SRSF12Q8WXF0 261 aaKnown RBP13.7□□□□□ -0.22
CIRBP-243ENST00000593128 USMG5Q96IX5 58 aa13.7□□□□□ -0.22
CIRBP-243ENST00000593128 H0Y980 276 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 DIRAS3O95661 229 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 PSMB9P28065 219 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 RHOGP84095 191 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 ZNF343Q6P1L6 599 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 KCTD9Q7L273 389 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 GTSCR1Q86UQ5 136 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 NR2C2APQ86WQ0 139 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 ADAD2Q8NCV1 583 aaKnown RBP13.69□□□□□ -0.22
CIRBP-243ENST00000593128 NUDCD2Q8WVJ2 157 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 DDB2Q92466 427 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
CIRBP-243ENST00000593128 STAB2Q8WWQ8 2551 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 RBMXL2O75526 392 aaKnown RBP13.68□□□□□ -0.22
CIRBP-243ENST00000593128 SAA1P0DJI8 122 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-243ENST00000593128 DTYMKP23919 212 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
CIRBP-243ENST00000593128 ARL6IP1Q15041 203 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 MRGPRG-AS1Q2M3A8 158 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 ZNF645Q8N7E2 425 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 OSR1Q8TAX0 266 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-243ENST00000593128 SNAPC3Q92966 411 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 CENPOQ9BU64 300 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 ZNF430Q9H8G1 570 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-243ENST00000593128 AKIP1Q9NQ31 210 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 DAPK2Q9UIK4 370 aa13.68□□□□□ -0.22
CIRBP-243ENST00000593128 TMEM235A6NFC5 223 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms