RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 MAFIPQ8WZ33 124 aa12.79□□□□□ -0.36
LINC01842-201ENST00000588275 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
LINC01842-201ENST00000588275 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
LINC01842-201ENST00000588275 A0A075B6Q4 140 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 A0A0B4J203 849 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 MSGN1A6NI15 193 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 PLA2G7Q13093 441 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 C2orf76Q3KRA6 126 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 VMA21Q3ZAQ7 101 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 HES5Q5TA89 166 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 IDO2Q6ZQW0 420 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 USMG5Q96IX5 58 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
LINC01842-201ENST00000588275 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
LINC01842-201ENST00000588275 RBMXL2O75526 392 aaKnown RBP12.77□□□□□ -0.37
LINC01842-201ENST00000588275 PRH1P02810 166 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 FCGR3AP08637 254 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 CD81P60033 236 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 SNAPC3Q92966 411 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 RAB3CQ96E17 227 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 GINS4Q9BRT9 223 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 PEMTQ9UBM1 199 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
LINC01842-201ENST00000588275 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.37
LINC01842-201ENST00000588275 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 OR2A4O95047 310 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 CRYZL1O95825 349 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 OR9G9P0C7N8 305 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 RRASP10301 218 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 RHOGP84095 191 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 TAGLNQ01995 201 aaKnown RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 EXOSC2Q13868 293 aaKnown RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 IRF3Q14653 427 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 TRAM1Q15629 374 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 ADAD2Q8NCV1 583 aaKnown RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 SRSF12Q8WXF0 261 aaKnown RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 THAP7Q9BT49 309 aaPredicted RBP12.76□□□□□ -0.37
LINC01842-201ENST00000588275 CCDC90BQ9GZT6 254 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 CEPT1Q9Y6K0 416 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 V9GY05 133 aa12.76□□□□□ -0.37
LINC01842-201ENST00000588275 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 J3QRK9 145 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 BRI3O95415 125 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 GNB3P16520 340 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 PSMA1P25786 263 aaKnown RBP12.75□□□□□ -0.37
LINC01842-201ENST00000588275 TPBGQ13641 420 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 PRSS8Q16651 343 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 AKIP1Q9NQ31 210 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 SIGLEC8Q9NYZ4 499 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 TPRKBQ9Y3C4 175 aa12.75□□□□□ -0.37
LINC01842-201ENST00000588275 BMPR1BO00238 502 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 RGS10O43665 173 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 TUSC2O75896 110 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 JTBO76095 146 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 ACTL6BO94805 426 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 TPPPO94811 219 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 GADD45AP24522 165 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 RANBP1P43487 201 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 UBE2KP61086 200 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 FABP5Q01469 135 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 CD300EQ496F6 205 aaPredicted RBP12.74□□□□□ -0.37
LINC01842-201ENST00000588275 TEX45Q8NA69 505 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 ADTRPQ96IZ2 230 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 DCUN1D5Q9BTE7 237 aa12.74□□□□□ -0.37
LINC01842-201ENST00000588275 FAM223BA6NKX1 122 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 LINC00473A8K010 186 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
LINC01842-201ENST00000588275 TALDO1P37837 337 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 ZNF45Q02386 682 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
LINC01842-201ENST00000588275 ARFRP1Q13795 201 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 C10orf55Q5SWW7 151 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 FAM223AQ8IWN6 122 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 OR10R2Q8NGX6 335 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 SLC2A8Q9NY64 477 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 PLECQ15149 4684 aaKnown RBP12.73□□□□□ -0.37
LINC01842-201ENST00000588275 ALMS1Q8TCU4 4167 aa12.73□□□□□ -0.37
LINC01842-201ENST00000588275 MFNGO00587 321 aa12.72□□□□□ -0.37
LINC01842-201ENST00000588275 AIREO43918 545 aa12.72□□□□□ -0.37
LINC01842-201ENST00000588275 OR2J3O76001 311 aa12.72□□□□□ -0.37
LINC01842-201ENST00000588275 CD7P09564 240 aa12.72□□□□□ -0.37
LINC01842-201ENST00000588275 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
LINC01842-201ENST00000588275 HIST1H1DP16402 221 aaKnown RBP12.72□□□□□ -0.37
LINC01842-201ENST00000588275 MAP2K4P45985 399 aa12.72□□□□□ -0.37
LINC01842-201ENST00000588275 PSMD7P51665 324 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms