RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 Q71RC1 249 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LYG2Q86SG7 212 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR2T10Q8NGZ9 312 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 GLYATL2Q8WU03 294 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ZDHHC16Q969W1 377 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 FLYWCH2Q96CP2 140 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 TP53RKQ96S44 253 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SSX3Q99909 188 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 TMEM222Q9H0R3 208 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 PLEKHA2Q9HB19 425 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LIN7CQ9NUP9 197 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGHV3-72A0A0B4J1Y9 119 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SNRPGP15A8MWD9 76 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 RAMP3O60896 148 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 VENTXO95231 258 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 DUS4LO95620 317 aaKnown RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 MOSP00540 346 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SERPINE2P07093 398 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SNRNP70P08621 437 aaKnown RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR5AC1P0C628 307 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 RPA2P15927 270 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SRD5A1P18405 259 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 VAMP1P23763 118 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IER3P46695 156 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LGALS7P47929 136 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CBX3Q13185 183 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 DHRS2Q13268 280 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SLC9A3R2Q15599 337 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR2B11Q5JQS5 317 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 Q6ZNX1 250 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SELENOHQ8IZQ5 122 aaKnown RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LRTM2Q8N967 370 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR4C13Q8NGP0 309 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR4S2Q8NH73 311 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OSR1Q8TAX0 266 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ZNF431Q8TF32 576 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 MITD1Q8WV92 249 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 C22orf15Q8WYQ4 148 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 EAF1Q96JC9 268 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 TMEM56Q96MV1 263 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ZNF48Q96MX3 618 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 AIFM2Q9BRQ8 373 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 GPN1Q9HCN4 374 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 TMEM56-RWDD3S4R434 201 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 TLN2Q9Y4G6 2542 aa7.35□□□□□ -1.23
CDK5RAP3-220ENST00000581160 A0A0A6YYJ9 748 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 PIGBOS1A0A0B4J2F0 54 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 MDFIC2A0A1B0GVS7 189 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 INAFM1C9JVW0 142 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CRLF1O75462 422 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ATG12O94817 140 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CRYZL1O95825 349 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 HRASP01112 189 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGKV1D-33P01593 117 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGKV1-33P01594 117 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGKV1-39P01597 117 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 HLA-AP01891 365 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGKV1-16P04430 117 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IGKV1D-39P04432 117 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CD24P25063 80 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 RPS16P62249 146 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SRPXP78539 464 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ANKRD55Q3KP44 614 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 ZNF695Q8IW36 515 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CADM3Q8N126 398 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 LGI3Q8N145 548 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 Q8N6K4 173 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SIGLECL1Q8N7X8 197 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 OR52B4Q8NGK2 314 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 CASTOR1Q8WTX7 329 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 IL22RA2Q969J5 263 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 RITA1Q96K30 269 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 SEC22CQ9BRL7 303 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 HIVEP2P31629 2446 aa7.34□□□□□ -1.23
CDK5RAP3-220ENST00000581160 NAV3Q8IVL0 2385 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 C7orf66A4D0T2 115 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 A6NDX4 124 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 SRRM4A7MD48 611 aaKnown RBP7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 H3BUX3 64 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 SHOXO15266 292 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 S1PR2O95136 353 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 NQO2P16083 231 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 TMEM11P17152 192 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 HES1Q14469 280 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 HNF4GQ14541 408 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 POU2AF1Q16633 256 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 RBMS3Q6XE24 437 aaKnown RBP7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 C12orf45Q8N5I9 185 aaPredicted RBP7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 TMEM86BQ8N661 226 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 NPBQ8NG41 125 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 OR5R1Q8NH85 324 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 COQ8AQ8NI60 647 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 LHFPL5Q8TAF8 219 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 SSMEM1Q8WWF3 244 aa7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 RBMXL1Q96E39 390 aaKnown RBP7.33□□□□□ -1.24
CDK5RAP3-220ENST00000581160 TSNAXQ99598 290 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms