RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 CFHR4Q92496 578 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 ZNF486Q96H40 463 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-225ENST00000569245 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 RSRP1Q9BUV0 290 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 ALX4Q9H161 411 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-225ENST00000569245 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
COMMD4-225ENST00000569245 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-225ENST00000569245 SLC22A5O76082 557 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 IGKV1D-33P01593 117 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 IGKV1-33P01594 117 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 CD28P10747 220 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 PGAM2P15259 253 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 GNRHRP30968 328 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 ZNF134P52741 427 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-225ENST00000569245 LINC00311Q8N616 119 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 SECTM1Q8WVN6 248 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-225ENST00000569245 ABHD14AQ9BUJ0 271 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 SLC5A7Q9GZV3 580 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 GHITMQ9H3K2 345 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 GAB2Q9UQC2 676 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
COMMD4-225ENST00000569245 IGHV3-72A0A0B4J1Y9 119 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 IGHV1-3A0A0C4DH29 117 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 GPR31O00270 319 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 SLC31A2O15432 143 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 DHFRP00374 187 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 RLN1P04808 185 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 OR8U9P0C7N5 309 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 TAS2R31P59538 309 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 UBE2MP61081 183 aaKnown RBP11.52□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF816Q0VGE8 651 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-225ENST00000569245 CT45A1Q5HYN5 189 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.57
COMMD4-225ENST00000569245 SLC25A42Q86VD7 318 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 ZBTB34Q8NCN2 500 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 OR8U1Q8NH10 309 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 CT45A3Q8NHU0 189 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 WNT10AQ9GZT5 417 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 C14orf166Q9Y224 244 aaKnown RBP11.52□□□□□ -0.57
COMMD4-225ENST00000569245 RBM7Q9Y580 266 aaKnown RBP11.52□□□□□ -0.57
COMMD4-225ENST00000569245 CMYA5Q8N3K9 4069 aa11.52□□□□□ -0.57
COMMD4-225ENST00000569245 NCBP2LA6PVI3 153 aaKnown RBP11.51□□□□□ -0.57
COMMD4-225ENST00000569245 ST8SIA5O15466 376 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 PRAF2O60831 178 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 AMY1AP04745 511 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 IL5P05113 134 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
COMMD4-225ENST00000569245 RND3P61587 244 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 DHODHQ02127 395 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 TMED4Q7Z7H5 227 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF645Q8N7E2 425 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 BVESQ8NE79 360 aa11.51□□□□□ -0.57
COMMD4-225ENST00000569245 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-225ENST00000569245 CITED2Q99967 270 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-225ENST00000569245 PI3P19957 117 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 RAB25P57735 213 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-225ENST00000569245 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-225ENST00000569245 ADAD2Q8NCV1 583 aaKnown RBP11.5□□□□□ -0.57
COMMD4-225ENST00000569245 TMEM230Q96A57 120 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 OR2D2Q9H210 308 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 SLC2A9Q9NRM0 540 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 ZNF221Q9UK13 617 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 RNF150Q9ULK6 438 aa11.5□□□□□ -0.57
COMMD4-225ENST00000569245 A0A0B4J293 547 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 RAB29O14966 203 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 TXNL1O43396 289 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 OR4E1P0C645 316 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 GPR12P47775 334 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 PIGPP57054 158 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 EIF4EBP1Q13541 118 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-225ENST00000569245 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 NDUFA11Q86Y39 141 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 ODF3L1Q8IXM7 274 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 ST6GALNAC6Q969X2 333 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 ABHD14BQ96IU4 210 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-225ENST00000569245 SDHAF2Q9NX18 166 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 WNK1Q9H4A3 2382 aa11.49□□□□□ -0.57
COMMD4-225ENST00000569245 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
COMMD4-225ENST00000569245 CRYM-AS1A6NIL9 109 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms