RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 FGF7P21781 194 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 TMEM241Q24JQ0 296 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 MRGPRDQ8TDS7 321 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 C5orf30Q96GV9 206 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 DOK5Q9P104 306 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 GAB2Q9UQC2 676 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 SMG1Q96Q15 3661 aaKnown RBP19.4■□□□□ 0.7
FOXA1-202ENST00000545425 ATRXP46100 2492 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 C17orf98A8MV24 154 aa19.39■□□□□ 0.7
FOXA1-202ENST00000545425 ELLP55199 621 aaPredicted RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 NKX6-1P78426 367 aaPredicted RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 ZNF816Q0VGE8 651 aaPredicted RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 ACOT6Q3I5F7 207 aaPredicted RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 PDLIM3Q53GG5 364 aaPredicted RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 OR10G9Q8NGN4 311 aa19.39■□□□□ 0.7
FOXA1-202ENST00000545425 OR10G7Q8NGN6 311 aa19.39■□□□□ 0.7
FOXA1-202ENST00000545425 UBALD1Q8TB05 177 aa19.39■□□□□ 0.7
FOXA1-202ENST00000545425 GSN-AS1Q9NRJ2 163 aa19.39■□□□□ 0.7
FOXA1-202ENST00000545425 GAR1Q9NY12 217 aaKnown RBP19.39■□□□□ 0.7
FOXA1-202ENST00000545425 ATMQ13315 3056 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 C3orf80F5H4A9 247 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 C15orf65H3BRN8 121 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 HPRT1P00492 218 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 CEBPDP49716 269 aaPredicted RBP19.39■□□□□ 0.69
FOXA1-202ENST00000545425 PMP22Q01453 160 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 NCR3LG1Q68D85 454 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 SSX7Q7RTT5 188 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 TGIF2LYQ8IUE0 185 aa19.39■□□□□ 0.69
FOXA1-202ENST00000545425 ZNF808Q8N4W9 903 aaPredicted RBP19.39■□□□□ 0.69
FOXA1-202ENST00000545425 WNT9BO14905 357 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 YPEL1O60688 119 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 VENTXO95231 258 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 FGF8P55075 233 aaPredicted RBP19.38■□□□□ 0.69
FOXA1-202ENST00000545425 ZNF343Q6P1L6 599 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 ZNF843Q8N446 348 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 C9orf106Q8NAJ2 232 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 RAB1CQ92928 201 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 SNX22Q96L94 193 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 YPEL2Q96QA6 119 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 SMIM7Q9BQ49 75 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 TXNDC17Q9BRA2 123 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 PROCRQ9UNN8 238 aa19.38■□□□□ 0.69
FOXA1-202ENST00000545425 TGIF2-C20orf24A0A0A6YYL0 155 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 IGHV2OR16-5A0A0B4J2B6 119 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 MGST3O14880 152 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 FAM87AP0C7U9 286 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 BRWD1-AS2P59051 145 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 ACSM6Q6P461 480 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 Q6ZR03 302 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 ZNF826PQ6ZT77 177 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 BEND4Q6ZU67 534 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 BTF3L4Q96K17 158 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 PYGO2Q9BRQ0 406 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 NPCDR1Q9BY65 106 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 CLN8Q9UBY8 286 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 KALRNO60229 2985 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 PIEZO2Q9H5I5 2752 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 MARCH11A6NNE9 402 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 SRRM5B3KS81 715 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 PPP1R2P9O14990 202 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 PRDX2P32119 198 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 NDUFA6P56556 154 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 SPCS3P61009 180 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 DEFB109BQ30KR1 87 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 FFAR4Q5NUL3 377 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 OR13A1Q8NGR1 328 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 ANAPC16Q96DE5 110 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 KCNIP2Q9NS61 270 aa19.37■□□□□ 0.69
FOXA1-202ENST00000545425 OR5H1A6NKK0 313 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BKO60814 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BJP06899 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BOP23527 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BBP33778 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 GPR12P47775 334 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BDP58876 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BCP62807 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST2H2BEQ16778 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.36■□□□□ 0.69
FOXA1-202ENST00000545425 PRAMEF6Q5VXH4 476 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 FDCSPQ8NFU4 85 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 LRRC29Q8WV35 223 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BHQ93079 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BNQ99877 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 HIST1H2BMQ99879 126 aa19.36■□□□□ 0.69
FOXA1-202ENST00000545425 ZNF71Q9NQZ8 489 aaPredicted RBP19.36■□□□□ 0.69
FOXA1-202ENST00000545425 ZG16O60844 167 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 CCL11P51671 97 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 VWA1Q6PCB0 445 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 BHLHA15Q7RTS1 189 aaPredicted RBP19.35■□□□□ 0.69
FOXA1-202ENST00000545425 R3HDM4Q96D70 268 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 SRD5A3Q9H8P0 318 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 WDR83OSQ9Y284 106 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 URGCP-MRPS24S4R325 110 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 IGKV1D-33P01593 117 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 IGKV1-33P01594 117 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 DUTP33316 252 aaKnown RBP19.35■□□□□ 0.69
FOXA1-202ENST00000545425 BSXQ3C1V8 233 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 Q3ZCU0 254 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 PSG11Q9UQ72 335 aa19.35■□□□□ 0.69
FOXA1-202ENST00000545425 IGHV1-18A0A0C4DH31 117 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms