RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 EIF4EBP1Q13541 118 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-205ENST00000541169 LIN54Q6MZP7 749 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 SHISA2Q6UWI4 295 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 MFSD4AQ8N468 514 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 FAM212BQ9NTI7 297 aaPredicted RBP14.92□□□□□ -0.02
VPS33A-205ENST00000541169 PTTG2Q9NZH5 202 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF580Q9UK33 172 aa14.92□□□□□ -0.02
VPS33A-205ENST00000541169 LINC00473A8K010 186 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 M0QYG6 137 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 RRHO14718 337 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 CREBL2O60519 120 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-205ENST00000541169 IGHG2P01859 326 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 HLA-DRB1P01911 266 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 IGKV1-16P04430 117 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 SURF2Q15527 256 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF79Q15937 498 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 C5orf64Q2M2E5 130 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 CNPY1Q3B7I2 92 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 ZNF818PQ6ZRF7 136 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 LHFPL1Q86WI0 220 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 TOMM5Q8N4H5 51 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 ZFAND1Q8TCF1 268 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 TCTEX1D2Q8WW35 142 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 S100ZQ8WXG8 99 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 C5orf30Q96GV9 206 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 SCGB3A2Q96PL1 93 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 TINAGL1Q9GZM7 467 aaPredicted RBP14.91□□□□□ -0.02
VPS33A-205ENST00000541169 SERTAD4Q9NUC0 356 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 SCP2D1Q9UJQ7 156 aa14.91□□□□□ -0.02
VPS33A-205ENST00000541169 SHOXO15266 292 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 PLGLAQ15195 96 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 VMA21Q3ZAQ7 101 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 FBLN7Q53RD9 439 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 AADACL3Q5VUY0 350 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 CHPT1Q8WUD6 406 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 WFDC12Q8WWY7 111 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 HARBI1Q96MB7 349 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 RSRP1Q9BUV0 290 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 SLC2A8Q9NY64 477 aa14.9□□□□□ -0.02
VPS33A-205ENST00000541169 AP4M1O00189 453 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 FCGR3BO75015 233 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 B3GALNT1O75752 331 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 HRASP01112 189 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 INPP1P49441 399 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 PSG5Q15238 335 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 C9orf152Q5JTZ5 239 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 TEX45Q8NA69 505 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 SRRQ9GZT4 340 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 WNT10AQ9GZT5 417 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 FXYD6Q9H0Q3 95 aa14.89□□□□□ -0.03
VPS33A-205ENST00000541169 PGLYRP1O75594 196 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-205ENST00000541169 CRYZL1O95825 349 aa14.88□□□□□ -0.03
VPS33A-205ENST00000541169 UBE2KP61086 200 aa14.88□□□□□ -0.03
VPS33A-205ENST00000541169 SLC35B1P78383 322 aa14.88□□□□□ -0.03
VPS33A-205ENST00000541169 OR4C16Q8NGL9 310 aa14.88□□□□□ -0.03
VPS33A-205ENST00000541169 TRIM63Q969Q1 353 aa14.88□□□□□ -0.03
VPS33A-205ENST00000541169 METTL1Q9UBP6 276 aaKnown RBP14.88□□□□□ -0.03
VPS33A-205ENST00000541169 HPRT1P00492 218 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 IGF1P05019 195 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 PGAM2P15259 253 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 LINC00205P59089 165 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 RND3P61587 244 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 SCGB2B2Q4G0G5 96 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 TRIQKQ629K1 86 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 ZNF562Q6V9R5 426 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 CENPVQ7Z7K6 275 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-205ENST00000541169 PPP1R27Q86WC6 154 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 COMMD1Q8N668 190 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 CCDC71LQ8N9Z2 235 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 OR4D10Q8NGI6 311 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 RITA1Q96K30 269 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 PLEKHA2Q9HB19 425 aa14.87□□□□□ -0.03
VPS33A-205ENST00000541169 HAX1O00165 279 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 FGF2P09038 288 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 ZNF735P0CB33 412 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 F2RP25116 425 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 TAS2R31P59538 309 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 RPL30P62888 115 aaKnown RBP14.86□□□□□ -0.03
VPS33A-205ENST00000541169 KLF9Q13886 244 aaPredicted RBP14.86□□□□□ -0.03
VPS33A-205ENST00000541169 SPAG16Q8N0X2 631 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 CADM3Q8N126 398 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 KLHDC1Q8N7A1 406 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 TAF15Q92804 592 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS33A-205ENST00000541169 CITED1Q99966 193 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 FBXL15Q9H469 300 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 SLC2A9Q9NRM0 540 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 COMMD9Q9P000 198 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 SIGLEC9Q9Y336 463 aa14.86□□□□□ -0.03
VPS33A-205ENST00000541169 NAP1L6A6NFF2 107 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 CENPXA8MT69 81 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 TNFSF12O43508 249 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 IGLV2-23P01705 113 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 VSIG10L2P0DP72 767 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 CNTFRP26992 372 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 IDO2Q6ZQW0 420 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 Q6ZS46 218 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 OR51H1Q8NH63 302 aa14.85□□□□□ -0.03
VPS33A-205ENST00000541169 OR4A5Q8NH83 315 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms