RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SUMO3P55854 103 aaPredicted RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 ZFP36L1Q07352 338 aaKnown RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 ADIRFQ15847 76 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 RSPO4Q2I0M5 234 aaPredicted RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 C16orf82Q7Z2V1 217 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 APOBEC3DQ96AK3 386 aaPredicted RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 DAZAP1Q96EP5 407 aaKnown RBP4.47□□□□□ -1.69
PROM1-220ENST00000540805 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 P2RX4Q99571 388 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 VPS25Q9BRG1 176 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 TMEM222Q9H0R3 208 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 TAAR3PQ9P1P4 343 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 PILRBQ9UKJ0 227 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 RNF114Q9Y508 228 aa4.47□□□□□ -1.69
PROM1-220ENST00000540805 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 KIR2DS1A0A191URI9 304 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 A8MXE2 369 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 PPP5D1E7EU14 171 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 IGLV3-1P01715 115 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 APELAP0DMC3 54 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 KIR2DS4P43632 304 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 KIR2DS1Q14954 304 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 CXorf66Q5JRM2 361 aaPredicted RBP4.46□□□□□ -1.69
PROM1-220ENST00000540805 LCN15Q6UWW0 184 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 SSX7Q7RTT5 188 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 TGIF2LYQ8IUE0 185 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 TMEM105Q8N8V8 129 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 ZNF441Q8N8Z8 693 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 SAP25Q8TEE9 199 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 PARD6AQ9NPB6 346 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 FUT9Q9Y231 359 aa4.46□□□□□ -1.69
PROM1-220ENST00000540805 C21orf140B9A014 251 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 CDX4O14627 284 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 TRAF3IP2O43734 574 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 SP1P08047 785 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 LINC00614P0C842 121 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 CCKARP32238 428 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 KLF3P57682 345 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 ABLIM2Q6H8Q1 611 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 MRGPRGQ86SM5 289 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 LRRC29Q8WV35 223 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 C10orf35Q96D05 121 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 NAT8Q9UHE5 227 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 ZNF816-ZNF321PA0A0X1KG74 233 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 DUXBA0A1W2PPF3 345 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 GRIFINA4D1Z8 144 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 RNF212BA8MTL3 300 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 C16orf97H3BN30 126 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 H7BYZ3 331 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 M0R1X1 148 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 CDIPTO14735 213 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 PPYP01298 95 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 METTL15P1P0C7V9 234 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 GALR1P47211 349 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 FGF8P55075 233 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 RAC3P60763 192 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 ZNF816Q0VGE8 651 aaPredicted RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 RNPS1Q15287 305 aaKnown RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 SMIM21Q3B7S5 101 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 LRRC10Q5BKY1 277 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TMEM211Q6ICI0 200 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TBC1D26Q86UD7 250 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 SELENOHQ8IZQ5 122 aaKnown RBP4.46□□□□□ -1.7
PROM1-220ENST00000540805 ADPRHL1Q8NDY3 354 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TMEM170AQ8WVE7 144 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TMEM56Q96MV1 263 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 SMIM7Q9BQ49 75 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 PYGO2Q9BRQ0 406 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 PCGF1Q9BSM1 259 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 Q9N2K0 584 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TMEM56-RWDD3S4R434 201 aa4.46□□□□□ -1.7
PROM1-220ENST00000540805 TRGV10A0A0A0MS01 117 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TMEM238C9JI98 176 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TIAF1O95411 115 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 PFN1P07737 140 aaKnown RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 IAPPP10997 89 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 F2RP25116 425 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 CTSSP25774 331 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 LY6DQ14210 128 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 ACOT6Q3I5F7 207 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 TOMM20LQ6UXN7 152 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 RAB1CQ92928 201 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 RPEQ96AT9 228 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 SPSB1Q96BD6 273 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 SLC39A9Q9NUM3 307 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 PIGBOS1A0A0B4J2F0 54 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TMEM210A6NLX4 147 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 ETV2O00321 342 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 HMGB3O15347 200 aaKnown RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 CHST1O43916 411 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TMEM50AO95807 157 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 NGFP01138 241 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 COL8A2P25067 703 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms