RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TCF15Q12870 199 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 PMS2P11Q13670 270 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 ELOBQ15370 118 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 AARDQ4LEZ3 155 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 FAM201AQ5SY85 155 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 FAM180AQ6UWF9 173 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 MRGPRGQ86SM5 289 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 C1QL4Q86Z23 238 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 OR10P1Q8NGE3 313 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 CIB3Q96Q77 187 aaPredicted RBP14.57□□□□□ -0.08
USH1C-205ENST00000527020 PLCE1Q9P212 2302 aa14.57□□□□□ -0.08
USH1C-205ENST00000527020 C15orf62A8K5M9 175 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 CEBPZOSA8MTT3 80 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 FCGR3BO75015 233 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 IGHV3-7P01780 117 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 FGF7P21781 194 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 RPL39P5Q59GN2 51 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 C1orf229Q6ZS94 237 aaPredicted RBP14.56□□□□□ -0.08
USH1C-205ENST00000527020 Q8WTZ3 238 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 P2RX4Q99571 388 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 IFI27L2Q9H2X8 130 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 VAX2Q9UIW0 290 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 CUL9Q8IWT3 2517 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 PCP4L1A6NKN8 68 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 RBMXL2O75526 392 aaKnown RBP14.56□□□□□ -0.08
USH1C-205ENST00000527020 CXCL1P09341 107 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 MEOX2P50222 304 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 ERVFRD-1P60508 538 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 PPP1R35Q8TAP8 253 aa14.56□□□□□ -0.08
USH1C-205ENST00000527020 SLC31A2O15432 143 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 S100A6P06703 90 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 CEACAM8P31997 349 aaPredicted RBP14.55□□□□□ -0.08
USH1C-205ENST00000527020 GNB2P62879 340 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 LHX4Q969G2 390 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 NPCDR1Q9BY65 106 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 SIRT7Q9NRC8 400 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 SLC39A9Q9NUM3 307 aa14.55□□□□□ -0.08
USH1C-205ENST00000527020 M0R1X1 148 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 HPRT1P00492 218 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 GATA4P43694 442 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 NUBP1P53384 320 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 EDDM3BP56851 147 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 Q8N7P7 452 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 FAM222BQ8WU58 562 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 FAM216AQ8WUB2 273 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 SLC25A22Q9H936 323 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 CALYQ9NYX4 217 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 OR6C3Q9NZP0 311 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 METTL1Q9UBP6 276 aaKnown RBP14.54□□□□□ -0.08
USH1C-205ENST00000527020 BSNQ9UPA5 3926 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 CXorf65A6NEN9 183 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 HMGB3O15347 200 aaKnown RBP14.54□□□□□ -0.08
USH1C-205ENST00000527020 CD81P60033 236 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 FAM27E3Q08E93 113 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 FABP9Q0Z7S8 132 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 C17orf58Q2M2W7 97 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 DUX4L9Q6RFH8 374 aaPredicted RBP14.54□□□□□ -0.08
USH1C-205ENST00000527020 RBMS3Q6XE24 437 aaKnown RBP14.54□□□□□ -0.08
USH1C-205ENST00000527020 SFXN3Q9BWM7 321 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 TMPRSS5Q9H3S3 457 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 ATMQ13315 3056 aa14.54□□□□□ -0.08
USH1C-205ENST00000527020 B4DEV8 164 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 FFAR4Q5NUL3 377 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 SSX9Q7RTT3 188 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 VKORC1L1Q8N0U8 176 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 FAM234AQ9H0X4 552 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 URGCP-MRPS24S4R325 110 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 RIF1Q5UIP0 2472 aaKnown RBP14.53□□□□□ -0.08
USH1C-205ENST00000527020 CTXND1A0A1B0GTU2 59 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 FAM90A9PA6NNJ1 464 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 WDR25Q64LD2 544 aaPredicted RBP14.53□□□□□ -0.08
USH1C-205ENST00000527020 OR10G9Q8NGN4 311 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 OR10G7Q8NGN6 311 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 DDB2Q92466 427 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 LEAP2Q969E1 77 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 SDF2L1Q9HCN8 221 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 GCM1Q9NP62 436 aa14.53□□□□□ -0.08
USH1C-205ENST00000527020 DYSFO75923 2080 aa14.52□□□□□ -0.08
USH1C-205ENST00000527020 TGIF2-C20orf24A0A0A6YYL0 155 aa14.52□□□□□ -0.08
USH1C-205ENST00000527020 RBFOX2O43251 390 aaKnown RBP eCLIP14.52□□□□□ -0.08
USH1C-205ENST00000527020 IFNA1P01562 189 aa14.52□□□□□ -0.08
USH1C-205ENST00000527020 IFNA17P01571 189 aa14.52□□□□□ -0.08
USH1C-205ENST00000527020 RPS10P46783 165 aaKnown RBP14.52□□□□□ -0.08
USH1C-205ENST00000527020 NCOR1P1Q9H4R4 102 aa14.52□□□□□ -0.08
USH1C-205ENST00000527020 RP1L1Q8IWN7 2480 aaPredicted RBP14.52□□□□□ -0.09
USH1C-205ENST00000527020 TRAV3A0A0B4J244 114 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 IGHV1-46P01743 117 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 CRYABP02511 175 aaKnown RBP14.51□□□□□ -0.09
USH1C-205ENST00000527020 NQO2P16083 231 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 CCKARP32238 428 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 PNRC1Q12796 327 aaPredicted RBP14.51□□□□□ -0.09
USH1C-205ENST00000527020 PRAMEF5Q5TYX0 476 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 TCF23Q7RTU1 214 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 PRSS33Q8NF86 280 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 FAM57AQ8TBR7 257 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 ANKRD11Q6UB99 2663 aaPredicted RBP14.51□□□□□ -0.09
USH1C-205ENST00000527020 A8MXE2 369 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 KLK10O43240 276 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 MBP02144 154 aa14.51□□□□□ -0.09
USH1C-205ENST00000527020 DEFA4P12838 97 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms