RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FBXL15Q9H469 300 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 PLSCR3Q9NRY6 295 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 ANAPC10Q9UM13 185 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 TSSC4Q9Y5U2 329 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 MXRA5Q9NR99 2828 aa4.28□□□□□ -1.72
HMGB1P40-201ENST00000525121 COL6A5A8TX70 2615 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 KIAA2026Q5HYC2 2103 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 TRAV41A0A0B4J266 112 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGKV1D-13A0A0B4J2D9 117 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 A0A1W2PRX2 142 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 FABP12A6NFH5 140 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 DISC1C4P0D8 188 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CTDSP2O14595 271 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CTDSPLO15194 276 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 MPPED1O15442 326 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 TNFSF12O43508 249 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 RAB3DO95716 219 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 HRASP01112 189 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 PF4P02776 101 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGKV1-13P0DP09 117 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CD28P10747 220 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 PGAM2P15259 253 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CNTFRP26992 372 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 SLC6A1P30531 599 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 FAUP35544 74 aaKnown RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ECI1P42126 302 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 RFX2P48378 723 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 INPP1P49441 399 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 AP3S2P59780 193 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 UBE2KP61086 200 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ERVK-16P61578 105 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 FOXE3Q13461 319 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 PRR31Q5SQ13 230 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 VAX1Q5SQQ9 334 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 DHRS11Q6UWP2 260 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF329Q86UD4 541 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 PPP1R27Q86WC6 154 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 SLC38A6Q8IZM9 456 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ARRDC1Q8N5I2 433 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 TMEM229BQ8NBD8 167 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR51H1Q8NH63 302 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 OR52I2Q8NH67 350 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 GRPEL2Q8TAA5 225 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 SMIM4Q8WVI0 70 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 DGCR14Q96DF8 476 aaKnown RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 NOL4LQ96MY1 436 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CLCC1Q96S66 551 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ABHD1Q96SE0 405 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 PHB2Q99623 299 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 HSPB9Q9BQS6 159 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 SLIRPQ9GZT3 109 aaKnown RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CCL28Q9NRJ3 127 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 MTFP1Q9UDX5 166 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 A3GALT2U3KPV4 340 aa4.27□□□□□ -1.73
HMGB1P40-201ENST00000525121 CUBNO60494 3623 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGHV7-81A0A0B4J1V7 117 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 LINC00473A8K010 186 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 M0QYG6 137 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 GPR31O00270 319 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 RBFOX2O43251 390 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 PROP1O75360 226 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 CA2P00918 260 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGHG4P01861 327 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 CD3DP04234 171 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 RLN1P04808 185 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 IGF1P05019 195 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 ELANEP08246 267 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 AKAIN1P0CW23 69 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 PTBP1P26599 531 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 TNFSF8P32971 234 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 LINC00205P59089 165 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 CX3CL1P78423 397 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 DGCR2P98153 550 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 FXYD3Q14802 87 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 TNXAQ16473 311 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 ECSCRQ19T08 205 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 SCGB2B2Q4G0G5 96 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 PYDC2Q56P42 97 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 STEAP1BQ6NZ63 245 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 UNQ5815/PRO19632Q6UWF5 114 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 TREML4Q6UXN2 200 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF562Q6V9R5 426 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 ZNF818PQ6ZRF7 136 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 MMD2Q8IY49 270 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 SPAG16Q8N0X2 631 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 MFSD4AQ8N468 514 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 CCDC71LQ8N9Z2 235 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 TEX45Q8NA69 505 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
HMGB1P40-201ENST00000525121 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms