RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SH3BGRL3Q9H299 93 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 LYRM4Q9HD34 91 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SPANXB1Q9NS25 103 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPRMQ9NS64 109 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 NECAP2Q9NVZ3 263 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 IL36BQ9NZH7 164 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 TAAR3PQ9P1P4 343 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 CSDC2Q9Y534 153 aaKnown RBP4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 ANK1P16157 1881 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 NUP210LQ5VU65 1888 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 LTBP4Q8N2S1 1624 aa4.06□□□□□ -1.76
HMGB1P19-201ENST00000517578 SCN2AQ99250 2005 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SBF1O95248 1867 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 KIAA1671Q9BY89 1806 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A087WX48 190 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGKV6D-21A0A0A0MT36 114 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 KIR2DS5A0A0G2JLQ3 304 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A0G2JNG1 304 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 KBTBD11-OT1A0A1B0GTJ5 212 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SMIM28A0A1B0GU29 152 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1B0GV50 99 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1B0GX51 115 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 LRRC3CA6NJW4 275 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF850A8MQ14 1090 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF878C9JN71 531 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 E9PLN8 166 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 PLPP3O14495 311 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 PTGESO14684 152 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 TNFRSF13BO14836 293 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CEACAM4O75871 244 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 DHRS3O75911 302 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CA1P00915 261 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CFIP05156 583 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 COX8AP10176 69 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC25A6P12236 298 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 GYPEP15421 78 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 FBLP22087 321 aaKnown RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 GCSHP23434 173 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 TM4SF1P30408 202 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ASIPP42127 132 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 NKX2-1P43699 371 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 EFNB2P52799 333 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CLRN1P58418 232 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SP4Q02446 784 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 EDDM3AQ14507 147 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 KIR2DS5Q14953 304 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR8B8Q15620 311 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPEL1Q2QD12 228 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM219BQ5XKK7 198 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 RHBDD2Q6NTF9 364 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC25A47Q6Q0C1 308 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 GLIPR1L1Q6UWM5 242 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ADAMTSL5Q6ZMM2 481 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM136Q6ZRR5 245 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q6ZVH6 145 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 PIANPQ8IYJ0 282 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR8B12Q8NGG6 310 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR5D14Q8NGL3 314 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR1L1Q8NH94 360 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 GRAPLQ8TC17 118 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 LMX1AQ8TE12 382 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 LHX4Q969G2 390 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 PIGTQ969N2 578 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGSF8Q969P0 613 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 APOBEC3DQ96AK3 386 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 PERPQ96FX8 193 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SGK494Q96LW2 274 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 VSTM2LQ96N03 204 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 RAB40CQ96S21 281 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SFXN3Q9BWM7 321 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 MRPL32Q9BYC8 188 aaKnown RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CXCL16Q9H2A7 254 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 MED20Q9H944 212 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 WDR76Q9H967 626 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ELOVL3Q9HB03 270 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF286AQ9HBT8 521 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 HES4Q9HCC6 221 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SH2D2AQ9NP31 389 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 SERTAD4Q9NUC0 356 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 LIN7CQ9NUP9 197 aaKnown RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 HCFC1R1Q9NWW0 138 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR1A1Q9P1Q5 309 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ONECUT1Q9UBC0 465 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 CES1P1Q9UKY3 287 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ABT1Q9ULW3 272 aaKnown RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF443Q9Y2A4 671 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 HEBP2Q9Y5Z4 205 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 ARL2-SNX15V9GYD0 113 aa4.05□□□□□ -1.76
HMGB1P19-201ENST00000517578 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGKV6-21A0A0C4DH24 114 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TRBV5-4A0A0C4DH59 114 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 CTXND1A0A1B0GTU2 59 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TEX50A0A1B0GTY4 177 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PRE2 83 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GRIFINA4D1Z8 144 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR4C46A6NHA9 309 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 CASTOR2A6NHX0 329 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms