RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 ASPHD2Q6ICH7 369 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF611Q8N823 705 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 CCL17Q92583 94 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 TMEM230Q96A57 120 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 WNT10AQ9GZT5 417 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 RAB18Q9NP72 206 aa7.32□□□□□ -1.24
LIMCH1-209ENST00000509277 A0A0U1RQV5 110 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 SYNGR1O43759 233 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 GSTP1P09211 210 aaKnown RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 TBPP20226 339 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 GABRA2P47869 451 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ERVFC1-1P60608 527 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 NRN1LQ496H8 165 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF787Q6DD87 383 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 TCF23Q7RTU1 214 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 C16orf82Q7Z2V1 217 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 OR13G1Q8NGZ3 307 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 SCGB1C1Q8TD33 95 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 NRGNQ92686 78 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ST6GALNAC6Q969X2 333 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 IMMP2LQ96T52 175 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 HSPB9Q9BQS6 159 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 EGLN1Q9GZT9 426 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 NAGKQ9UJ70 344 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 RNF115Q9Y4L5 304 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 IGHV3OR15-7A0A075B7D8 119 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 HS3ST1O14792 307 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 RHBDL1O75783 438 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 CDKN1AP38936 164 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 NPBWR2P48146 333 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 HNRNPA3P51991 378 aaKnown RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 LBHQ53QV2 105 aaPredicted RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 LDLRAD2Q5SZI1 272 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 MOGAT3Q86VF5 341 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF808Q8N4W9 903 aaPredicted RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ZDHHC22Q8N966 263 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 OR4F5Q8NH21 305 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 MRGPRFQ96AM1 343 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 OR4F4Q96R69 305 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 REPIN1Q9BWE0 567 aaKnown RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 DECR2Q9NUI1 292 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 IL36RNQ9UBH0 155 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 DSCAMO60469 2012 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 GCN1Q92616 2671 aaKnown RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 NXPH2O95156 264 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 OR5G3P0C626 314 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 CEBPDP49716 269 aaPredicted RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 HERV-K104P61576 105 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF695Q8IW36 515 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 TMEM183AQ8IXX5 376 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 RDH5Q92781 318 aa7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 RBMXL1Q96E39 390 aaKnown RBP7.31□□□□□ -1.24
LIMCH1-209ENST00000509277 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 FBLL1A6NHQ2 334 aaKnown RBP7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 E5RGE8 158 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 TRAPPC2LH3BP13 241 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 WNT9BO14905 357 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 IFNA5P01569 189 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 ISG15P05161 165 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 DANCRP0C864 163 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 UNC119Q13432 240 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 SAPCD1Q5SSQ6 148 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 OR51H1Q8NH63 302 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 RNF150Q9ULK6 438 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 NSG2Q9Y328 171 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 MEGF11A6BM72 1044 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 SUPT4H1P63272 117 aaKnown RBP7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 PIGYQ3MUY2 71 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF260Q3ZCT1 412 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 FBXL14Q8N1E6 418 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 PP6455Q8WZ26 134 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 OR2V2Q96R30 315 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
LIMCH1-209ENST00000509277 TRAV39A0A0B4J263 110 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 GLIPR1P48060 266 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 DYNLT3P51808 116 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 TNFAIP6P98066 277 aaPredicted RBP7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 SPRNQ5BIV9 151 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 TGIF2LYQ8IUE0 185 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 MUC15Q8N387 334 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 EMG1Q92979 244 aaKnown RBP7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 RTL8AQ9BWD3 113 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 LPAR5Q9H1C0 372 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 SLC25A22Q9H936 323 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 ZNF581Q9P0T4 197 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 CREBBPQ92793 2442 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 ARFGEF3Q5TH69 2177 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 IGKV1-27A0A075B6S5 117 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 PGPEP1LA6NFU8 196 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 E7EQL1 145 aa7.29□□□□□ -1.24
LIMCH1-209ENST00000509277 SIRPB1O00241 398 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms