RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IGHG2P01859 326 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 CSF1P09603 554 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 BRWD1-AS2P59051 145 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 TAGLNQ01995 201 aaKnown RBP15.36■□□□□ 0.05
HDAC4-212ENST00000495497 PLGLAQ15195 96 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 MSMO1Q15800 293 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 RTL8BQ17RB0 113 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 CNPY1Q3B7I2 92 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 TMEM177Q53S58 311 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 AADACL3Q5VUY0 350 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 C10orf99Q6UWK7 81 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 ZNF66Q6ZN08 573 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 ZBTB34Q8NCN2 500 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 HARBI1Q96MB7 349 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 HSD17B10Q99714 261 aaKnown RBP15.36■□□□□ 0.05
HDAC4-212ENST00000495497 RNF5Q99942 180 aa15.36■□□□□ 0.05
HDAC4-212ENST00000495497 THAP7Q9BT49 309 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-212ENST00000495497 FCN1O00602 326 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 SHOXO15266 292 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 ZNF735P0CB33 412 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 RRASP10301 218 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 TBPP20226 339 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 CBX3Q13185 183 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 LIN54Q6MZP7 749 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 SHISA2Q6UWI4 295 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 Q8N402 240 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 TSNAXQ99598 290 aaKnown RBP15.35■□□□□ 0.05
HDAC4-212ENST00000495497 CITED1Q99966 193 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 TPSG1Q9NRR2 321 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 METTL1Q9UBP6 276 aaKnown RBP15.35■□□□□ 0.05
HDAC4-212ENST00000495497 PRELID3BQ9Y3B1 194 aa15.35■□□□□ 0.05
HDAC4-212ENST00000495497 ANKRD20A5PA0PJZ0 165 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 SLC25A17O43808 307 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 CD28P10747 220 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 ETV6P41212 452 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 SCGB2B2Q4G0G5 96 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 SPANXN2Q5MJ10 180 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 CENPVQ7Z7K6 275 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-212ENST00000495497 OR4C16Q8NGL9 310 aa15.34■□□□□ 0.05
HDAC4-212ENST00000495497 WIPF2Q8TF74 440 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-212ENST00000495497 IGHV7-81A0A0B4J1V7 117 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 GPR31O00270 319 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 HLA-DRB1P01911 266 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 AKAIN1P0CW23 69 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 PTBP1P26599 531 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC4-212ENST00000495497 PHLDA2Q53GA4 152 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 LHFPL1Q86WI0 220 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 ARRDC1Q8N5I2 433 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 OR51H1Q8NH63 302 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 RSRP1Q9BUV0 290 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 SRRQ9GZT4 340 aa15.33■□□□□ 0.04
HDAC4-212ENST00000495497 RAMP3O60896 148 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 PGLYRP1O75594 196 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-212ENST00000495497 RLN1P04808 185 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 PGAM2P15259 253 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 LGALS7P47929 136 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 PPP5CP53041 499 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 ZNF329Q86UD4 541 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 SPAG16Q8N0X2 631 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 OR5AU1Q8NGC0 362 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 TRIM63Q969Q1 353 aa15.32■□□□□ 0.04
HDAC4-212ENST00000495497 DISC1C4P0D8 188 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 KCNAB3O43448 404 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 SPDEFO95238 335 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 CA2P00918 260 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 CRYGBP07316 175 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 PI3P19957 117 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 UCP3P55916 312 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 NDPQ00604 133 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 PJVKQ0ZLH3 352 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 CATR1Q13166 79 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 MEF2DQ14814 521 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 IDO2Q6ZQW0 420 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 FOXRED2Q8IWF2 684 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 VKORC1L1Q8N0U8 176 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 STPG2Q8N412 459 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 OR4S2Q8NH73 311 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 MRGPRFQ96AM1 343 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 OR51J1Q9H342 316 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 PARP11Q9NR21 331 aa15.31■□□□□ 0.04
HDAC4-212ENST00000495497 PSMB11A5LHX3 300 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 AP4M1O00189 453 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 ATP6V0E1O15342 81 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 CX3CL1P78423 397 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 KLF9Q13886 244 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-212ENST00000495497 LPCAT3Q6P1A2 487 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 CMTM1Q8IZ96 169 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 SLC38A6Q8IZM9 456 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 OR51S1Q8NGJ8 323 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 TERB2Q8NHR7 220 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 OSR1Q8TAX0 266 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-212ENST00000495497 BORCS5Q969J3 196 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 FBXO7Q9Y3I1 522 aa15.3■□□□□ 0.04
HDAC4-212ENST00000495497 CMYA5Q8N3K9 4069 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 FBXO24O75426 580 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 SAA1P0DJI8 122 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-212ENST00000495497 KIR2DS2P43631 304 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 UBE2KP61086 200 aa15.29■□□□□ 0.04
HDAC4-212ENST00000495497 GNB1P62873 340 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms