RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 UXS1Q8NBZ7 420 aa15.58■□□□□ 0.08
USP39-218ENST00000493829 ALX4Q9H161 411 aaPredicted RBP15.58■□□□□ 0.08
USP39-218ENST00000493829 A0A0A6YYJ9 748 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 VENTXO95231 258 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 TMEM187Q14656 261 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 ZNF585BQ52M93 769 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 OR4S2Q8NH73 311 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 LHFPL5Q8TAF8 219 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 ZNF431Q8TF32 576 aaPredicted RBP15.57■□□□□ 0.08
USP39-218ENST00000493829 GLYATL2Q8WU03 294 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 GALNT14Q96FL9 552 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 TMEM222Q9H0R3 208 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 GPN1Q9HCN4 374 aaPredicted RBP15.57■□□□□ 0.08
USP39-218ENST00000493829 PRAF2O60831 178 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 IL5P05113 134 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 KIR2DS2P43631 304 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 C9orf139Q6ZV77 190 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 ZDHHC16Q969W1 377 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 ZNF48Q96MX3 618 aaPredicted RBP15.57■□□□□ 0.08
USP39-218ENST00000493829 TMEM160Q9NX00 188 aa15.57■□□□□ 0.08
USP39-218ENST00000493829 CREBL2O60519 120 aaPredicted RBP15.56■□□□□ 0.08
USP39-218ENST00000493829 UCP1P25874 307 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 BRS3P32247 399 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 TMEM268Q5VZI3 342 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 LIAT1Q6ZQX7 453 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 PDPNQ86YL7 162 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 VKORC1L1Q8N0U8 176 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 RITA1Q96K30 269 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 HARBI1Q96MB7 349 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 SSX3Q99909 188 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 TNFRSF19Q9NS68 423 aa15.56■□□□□ 0.08
USP39-218ENST00000493829 H3BUX3 64 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 DUS4LO95620 317 aaKnown RBP15.55■□□□□ 0.08
USP39-218ENST00000493829 IGKV1-39P01597 117 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 IGKV1D-39P04432 117 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 MC5RP33032 325 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 LRRC75BQ2VPJ9 315 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 SSX9Q7RTT3 188 aa15.55■□□□□ 0.08
USP39-218ENST00000493829 A0A1B0GVG6 124 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 SHOXO15266 292 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 SSNA1O43805 119 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 RRASP10301 218 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 SRD5A1P18405 259 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 CNTFRP26992 372 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 CD1BP29016 333 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 G6PCP35575 357 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 RPS16P62249 146 aaKnown RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 HABP2Q14520 560 aaPredicted RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 LY6EQ16553 131 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 Q6ZNX1 250 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 ZNF695Q8IW36 515 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 SIGLECL1Q8N7X8 197 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 COQ8AQ8NI60 647 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 CD300LFQ8TDQ1 290 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 FLYWCH2Q96CP2 140 aaKnown RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 MEGF9Q9H1U4 602 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 CDC42EP3Q9UKI2 254 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 F8P00451 2351 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 ANK3Q12955 4377 aaKnown RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 KRASP01116 189 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 IGHV4-59P01825 116 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 DHRS7BQ6IAN0 325 aaPredicted RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 TMEM219Q86XT9 240 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 LGI3Q8N145 548 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 SLC35G3Q8N808 338 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 RNASE11Q8TAA1 199 aaKnown RBP15.54■□□□□ 0.08
USP39-218ENST00000493829 MITD1Q8WV92 249 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 PHB2Q99623 299 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 OR51J1Q9H342 316 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 MAST4O15021 2626 aa15.54■□□□□ 0.08
USP39-218ENST00000493829 C7orf66A4D0T2 115 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 RBFOX2O43251 390 aaKnown RBP eCLIP15.53■□□□□ 0.08
USP39-218ENST00000493829 B3GALNT1O75752 331 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 HPRT1P00492 218 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 MOSP00540 346 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 TMEM11P17152 192 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 AKR1C2P52895 323 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 TAGLNQ01995 201 aaKnown RBP15.53■□□□□ 0.08
USP39-218ENST00000493829 SELENOHQ8IZQ5 122 aaKnown RBP15.53■□□□□ 0.08
USP39-218ENST00000493829 C12orf45Q8N5I9 185 aaPredicted RBP15.53■□□□□ 0.08
USP39-218ENST00000493829 TCTEX1D1Q8N7M0 179 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 OR4C13Q8NGP0 309 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 R3HDM4Q96D70 268 aa15.53■□□□□ 0.08
USP39-218ENST00000493829 EAF1Q96JC9 268 aaPredicted RBP15.53■□□□□ 0.08
USP39-218ENST00000493829 MXRA5Q9NR99 2828 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 HIVEP2P31629 2446 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 VGLL3A8MV65 326 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 SNRPGP15A8MWD9 76 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 CCSO14618 274 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 ADAP1O75689 374 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 CDS2O95674 445 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 HOXB5P09067 269 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 FAM106CPP0CH98 169 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 SRPXP78539 464 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 LYZL2Q7Z4W2 148 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 DMBX1Q8NFW5 382 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 OR2T10Q8NGZ9 312 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 PIFOQ8TCI5 191 aa15.52■□□□□ 0.08
USP39-218ENST00000493829 RBPMSQ93062 196 aaKnown RBP15.52■□□□□ 0.08
USP39-218ENST00000493829 PLEKHA2Q9HB19 425 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms