RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	INS-IGF2	F8WCM5	200 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	GPR31	O00270	319 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	ATG12	O94817	140 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	HPRT1	P00492	218 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	HRAS	P01112	189 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGLV2-23	P01705	113 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGHG4	P01861	327 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	OPN1MW	P04001	364 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	IFNA6	P05013	189 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	CRYGB	P07316	175 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	ELANE	P08246	267 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	AKAIN1	P0CW23	69 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	OPN1MW2	P0DN77	364 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	OPN1MW3	P0DN78	364 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	AADAC	P22760	399 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	F2R	P25116	425 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	CD40LG	P29965	261 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	GNRHR	P30968	328 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	RFX2	P48378	723 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	HERV-K104	P61576	105 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC35B1	P78383	322 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	CD83	Q01151	205 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	RUNX1	Q01196	453 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	CFHR3	Q02985	330 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	IL18	Q14116	193 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	DIAPH2-AS1	Q14236	149 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	MMD	Q15546	238 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	ZNF79	Q15937	498 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	LTC4S	Q16873	150 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	STEAP1B	Q6NZ63	245 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	MOB3B	Q86TA1	216 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	PPP1R27	Q86WC6	154 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	FAM219A	Q8IW50	185 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	PUSL1	Q8N0Z8	303 aa	Known RBP	4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	POC5	Q8NA72	575 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	MINDY2	Q8NBR6	621 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR5M8	Q8NGP6	311 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	OR52I2	Q8NH67	350 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM167A	Q8TBQ9	72 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	LEAP2	Q969E1	77 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	IL22RA2	Q969J5	263 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	GALNT14	Q96FL9	552 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	TSC22D3	Q99576	134 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	RASL11B	Q9BPW5	248 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	CCDC32	Q9BV29	185 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SRR	Q9GZT4	340 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	PARP12	Q9H0J9	701 aa	Known RBP	4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLA2	Q9H6Q3	261 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SLC35D1	Q9NTN3	355 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	KLK11	Q9UBX7	282 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SCP2D1	Q9UJQ7	156 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SIGLEC9	Q9Y336	463 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	SOX21	Q9Y651	276 aa	Predicted RBP	4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	PKD1L1	Q8TDX9	2849 aa		4.03	□□□□□ -1.76
HDAC6-223	ENST00000480525	NOTCH3	Q9UM47	2321 aa		4.03	□□□□□ -1.77
HDAC6-223	ENST00000480525	TRRAP	Q9Y4A5	3859 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGKV1D-13	A0A0B4J2D9	117 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525		A0A1W2PPE3	182 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	DUXB	A0A1W2PPF3	345 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	CCDC160	A6NGH7	325 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	LINC00473	A8K010	186 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	DISC1	C4P0D8	188 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525		H0Y980	276 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525		M0R1X1	148 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	KBTBD11	O94819	623 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	RAB3D	O95716	219 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGLV1-40	P01703	118 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	CD3D	P04234	171 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGKV1-16	P04430	117 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	CTSD	P07339	412 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF735	P0CB33	412 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	IGKV1-13	P0DP09	117 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	NQO2	P16083	231 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	MDK	P21741	143 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	NFYA	P23511	347 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	PPIF	P30405	207 aa	Known RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	VDAC2	P45880	294 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	TSPAN5	P62079	268 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	FOXE3	Q13461	319 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	KLF9	Q13886	244 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	HES1	Q14469	280 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	PSG5	Q15238	335 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	VMA21	Q3ZAQ7	101 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	RPL39P5	Q59GN2	51 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	FOXB2	Q5VYV0	432 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	LIN54	Q6MZP7	749 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	TEX38	Q6PEX7	206 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	FAM131A	Q6UXB0	335 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF818P	Q6ZRF7	136 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	SLC35E3	Q7Z769	313 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	ZNF429	Q86V71	674 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	NDUFA11	Q86Y39	141 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	SNX29P2	Q8IUI4	249 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	MMD2	Q8IY49	270 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525		Q8N402	240 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	STPG2	Q8N412	459 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	MFSD4A	Q8N468	514 aa		4.02	□□□□□ -1.77
HDAC6-223	ENST00000480525	C3orf56	Q8N813	242 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms