RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SAMD5Q5TGI4 173 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 AADACL3Q5VUY0 350 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 ZNF818PQ6ZRF7 136 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 TMEM17Q86X19 198 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 PDPNQ86YL7 162 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 ARRDC1Q8N5I2 433 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 RNF5Q99942 180 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 SLC35D1Q9NTN3 355 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 SIGLEC9Q9Y336 463 aa15.15■□□□□ 0.02
USP11-205ENST00000467378 SH2D7A6NKC9 451 aaPredicted RBP15.14■□□□□ 0.01
USP11-205ENST00000467378 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
USP11-205ENST00000467378 IGKV1-16P04430 117 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 ABCA11PQ4W5N1 156 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 ZNF66Q6ZN08 573 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 LINC00299Q6ZSB3 139 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 LHFPL1Q86WI0 220 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 MFSD4AQ8N468 514 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 BVESQ8NE79 360 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 NPBQ8NG41 125 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 TRIM63Q969Q1 353 aa15.14■□□□□ 0.01
USP11-205ENST00000467378 HSD17B10Q99714 261 aaKnown RBP15.14■□□□□ 0.01
USP11-205ENST00000467378 NDUFA3O95167 84 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 AKAIN1P0CW23 69 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 UCP3P55916 312 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 MEF2DQ14814 521 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 FAM71E2Q8N5Q1 922 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 OR4C16Q8NGL9 310 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 GPHA2Q96T91 129 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 SDHCQ99643 169 aaPredicted RBP15.13■□□□□ 0.01
USP11-205ENST00000467378 PTTG2Q9NZH5 202 aa15.13■□□□□ 0.01
USP11-205ENST00000467378 NBR2O15453 112 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 TNFSF12O43508 249 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 RRASP10301 218 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 BRWD1-AS2P59051 145 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 ZNF45Q02386 682 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 MMDQ15546 238 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 TMEM177Q53S58 311 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 FAAP20Q6NZ36 180 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 LPCAT3Q6P1A2 487 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 KCTD9Q7L273 389 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 GDPD1Q8N9F7 314 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 OR2T6Q8NHC8 308 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 BORCS5Q969J3 196 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 FLYWCH2Q96CP2 140 aaKnown RBP15.12■□□□□ 0.01
USP11-205ENST00000467378 RSRP1Q9BUV0 290 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 SERTAD4Q9NUC0 356 aa15.12■□□□□ 0.01
USP11-205ENST00000467378 LIN7CQ9NUP9 197 aaKnown RBP15.12■□□□□ 0.01
USP11-205ENST00000467378 RPS16P62249 146 aaKnown RBP15.11■□□□□ 0.01
USP11-205ENST00000467378 KLF9Q13886 244 aaPredicted RBP15.11■□□□□ 0.01
USP11-205ENST00000467378 BAK1Q16611 211 aa15.11■□□□□ 0.01
USP11-205ENST00000467378 TERB2Q8NHR7 220 aa15.11■□□□□ 0.01
USP11-205ENST00000467378 RASL11BQ9BPW5 248 aa15.11■□□□□ 0.01
USP11-205ENST00000467378 PRELID3BQ9Y3B1 194 aa15.11■□□□□ 0.01
USP11-205ENST00000467378 DISC1C4P0D8 188 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 GPR31O00270 319 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 FCGR3BO75015 233 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
USP11-205ENST00000467378 OPN1MWP04001 364 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 OPN1MW2P0DN77 364 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 OPN1MW3P0DN78 364 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 PSG5Q15238 335 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 RTL8BQ17RB0 113 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 C9orf152Q5JTZ5 239 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 TCTEX1D2Q8WW35 142 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 MRGPRFQ96AM1 343 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 AKIP1Q9NQ31 210 aa15.1■□□□□ 0.01
USP11-205ENST00000467378 SRRM4A7MD48 611 aaKnown RBP15.09■□□□□ 0.01
USP11-205ENST00000467378 RRHO14718 337 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 PEX14O75381 377 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 IGLV2-23P01705 113 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 IGHG2P01859 326 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 LGALS7P47929 136 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 CBX3Q13185 183 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 C5orf64Q2M2E5 130 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 TMEM95Q3KNT9 176 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 SCGB2B2Q4G0G5 96 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 SLC38A6Q8IZM9 456 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 TOMM5Q8N4H5 51 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 TSNAXQ99598 290 aaKnown RBP15.09■□□□□ 0.01
USP11-205ENST00000467378 FBXL15Q9H469 300 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 KIAA1456Q9P272 454 aa15.09■□□□□ 0.01
USP11-205ENST00000467378 LINC01548A6NM66 108 aa15.08■□□□□ 0
USP11-205ENST00000467378 CRYZL1O95825 349 aa15.08■□□□□ 0
USP11-205ENST00000467378 VDAC2P45880 294 aaPredicted RBP15.08■□□□□ 0
USP11-205ENST00000467378 CATR1Q13166 79 aa15.08■□□□□ 0
USP11-205ENST00000467378 OR2B11Q5JQS5 317 aa15.08■□□□□ 0
USP11-205ENST00000467378 CMTM1Q8IZ96 169 aa15.08■□□□□ 0
USP11-205ENST00000467378 OR51S1Q8NGJ8 323 aa15.08■□□□□ 0
USP11-205ENST00000467378 OSR1Q8TAX0 266 aaPredicted RBP15.08■□□□□ 0
USP11-205ENST00000467378 HARBI1Q96MB7 349 aa15.08■□□□□ 0
USP11-205ENST00000467378 WNT10AQ9GZT5 417 aa15.08■□□□□ 0
USP11-205ENST00000467378 HRASLSQ9HDD0 168 aa15.08■□□□□ 0
USP11-205ENST00000467378 SLC2A8Q9NY64 477 aa15.08■□□□□ 0
USP11-205ENST00000467378 SHOXO15266 292 aa15.07■□□□□ 0
USP11-205ENST00000467378 SPDEFO95238 335 aa15.07■□□□□ 0
USP11-205ENST00000467378 CRYGBP07316 175 aa15.07■□□□□ 0
USP11-205ENST00000467378 KIR2DS2P43631 304 aa15.07■□□□□ 0
USP11-205ENST00000467378 PPP5CP53041 499 aa15.07■□□□□ 0
USP11-205ENST00000467378 AP3S2P59780 193 aa15.07■□□□□ 0
USP11-205ENST00000467378 ARSJQ5FYB0 599 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms