RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CEACAM18A8MTB9 384 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNF212BA8MTL3 300 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 DEFB108AA8MXU0 73 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 C12orf77C9JDV5 145 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 GPR31O00270 319 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 PHF1O43189 567 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ADAM20O43506 726 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 NDUFB3O43676 98 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TSC22D2O75157 780 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SIX6O95475 246 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 DUS4LO95620 317 aaKnown RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 PET100P0DJ07 73 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RCC1P18754 421 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CXCL3P19876 107 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 C4BPBP20851 252 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 GNRHRP30968 328 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CFHR2P36980 270 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 LUMP51884 338 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TFF3Q07654 80 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 FGL1Q08830 312 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CATR1Q13166 79 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SMCO1Q147U7 214 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 HERPUD1Q15011 391 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 LRRC37A5PQ49AS3 106 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPRNQ5BIV9 151 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 LRRC10Q5BKY1 277 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CXorf66Q5JRM2 361 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM201AQ5SY85 155 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TEX36Q5VZQ5 186 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 STUMQ69YW2 141 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF660Q6AZW8 331 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 THOC7Q6I9Y2 204 aaKnown RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 DHRS11Q6UWP2 260 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CLEC18BQ6UXF7 455 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 H1FOOQ8IZA3 346 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 LGI3Q8N145 548 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZCCHC24Q8N2G6 241 aaKnown RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM216BQ8N7L0 139 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TPRX1Q8N7U7 411 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 DRAXINQ8NBI3 349 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR1L1Q8NH94 360 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ANGPTL6Q8NI99 470 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 GRPEL2Q8TAA5 225 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 MITD1Q8WV92 249 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RTN4IP1Q8WWV3 396 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 H1FXQ92522 213 aaKnown RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CCL17Q92583 94 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 ARL11Q969Q4 196 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM230Q96A57 120 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 C14orf79Q96F83 325 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 TIMD4Q96H15 378 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 COQ2Q96H96 371 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 LURAP1Q96LR2 239 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 C17orf77Q96MU5 243 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 GAFA1Q96PS6 74 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPIN2AQ99865 258 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPIN2BQ9BPZ2 258 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RTBDNQ9BSG5 229 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SUCNR1Q9BXA5 334 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RAB18Q9NP72 206 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC2A9Q9NRM0 540 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 CBLN4Q9NTU7 201 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 RDH8Q9NYR8 311 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR1A1Q9P1Q5 309 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 GNG12Q9UBI6 72 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 SHPKQ9UHJ6 478 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 JPT1Q9UK76 154 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 MMP24Q9Y5R2 645 aa3.09□□□□□ -1.91
HMGB3P20-201ENST00000417997 PTPRZ1P23471 2315 aaPredicted RBP3.09□□□□□ -1.92
HMGB3P20-201ENST00000417997 CFAP54Q96N23 3096 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGHV3-43A0A0B4J1X8 118 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGKV1D-13A0A0B4J2D9 117 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGKV1-6A0A0C4DH72 117 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 C3orf85A0A1B0GTC6 90 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 DUXBA0A1W2PPF3 345 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 hADV38S2A0JD32 116 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 MEX3AA1L020 520 aaKnown RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF729A6NN14 1252 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 FAM90A26D6RGX4 464 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 H0Y980 276 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 K7N7A8 449 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 L7N2F9 121 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 SIGLEC5O15389 551 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ARPC5O15511 151 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 TNFSF12O43508 249 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 ZNF737O75373 536 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 GOSR1O95249 250 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 LHBP01229 141 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 HBZP02008 142 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 PRB1P04280 392 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGHV3-43DP0DP04 118 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 IGKV1-13P0DP09 117 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 SELLP14151 372 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 RPS2P15880 293 aaKnown RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 NFYBP25208 207 aa3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 LOXP28300 417 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P20-201ENST00000417997 SSTR5P35346 364 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms