RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CEACAM21Q3KPI0 293 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR2T2Q6IF00 324 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 SFXN4Q6P4A7 337 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 ASCL4Q6XD76 172 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR5AS1Q8N127 324 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 STXBP6Q8NFX7 210 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR8G5Q8NG78 346 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR51A2Q8NGJ7 313 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR13C9Q8NGT0 318 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR13G1Q8NGZ3 307 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 LINC01560Q8TB33 94 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 NDNFQ8TB73 568 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 AP3S1Q92572 193 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 DHRS9Q9BPW9 319 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLIRPQ9GZT3 109 aaKnown RBP3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 TPK1Q9H3S4 243 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 RNF167Q9H6Y7 350 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 METTL17Q9H7H0 456 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 RHOFQ9HBH0 211 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 TAS2R4Q9NYW5 299 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 ABRACLQ9P1F3 81 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 SLC7A11Q9UPY5 501 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 AK6Q9Y3D8 172 aaKnown RBP3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 RHBDD3Q9Y3P4 386 aa3.44□□□□□ -1.86
HMGB3P19-201ENST00000403971 YLPM1P49750 1951 aaKnown RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PTPN13Q12923 2485 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGHV2-70DA0A0C4DH43 119 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 A0A1B0GWB2 263 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PQLC2LA1A4F0 135 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF850A8MQ14 1090 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 E7EQL1 145 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 H3BSH0 61 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 C19orf84I3L1E1 186 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 TIMM8AO60220 97 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF780AO75290 641 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 CLPXO76031 633 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MAS1P04201 325 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR4A8P0C604 315 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 UBBP0CG47 229 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 HTR2CP28335 458 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF93P35789 620 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 TGFBR1P36897 503 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MPV17P39210 176 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 FABP6P51161 128 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ATP1B3P54709 279 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ERVS71-1P61550 626 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF45Q02386 682 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PRDX4Q13162 271 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 GPR176Q14439 515 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 KISS1Q15726 138 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ALKBH6Q3KRA9 238 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 ZNF404Q494X3 552 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM255AQ5JRV8 349 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PLCXD3Q63HM9 321 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 FAM71F2Q6NXP2 309 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR2W3Q7Z3T1 314 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 SAXO1Q8IYX7 474 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PXT1Q8NFP0 134 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MCFD2Q8NI22 146 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR5P3Q8WZ94 311 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PIGCQ92535 297 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PTX4Q96A99 478 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MRPS24Q96EL2 167 aaKnown RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 BORCS8Q96FH0 119 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 TXN2Q99757 166 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MICU1Q9BPX6 476 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 DCUN1D5Q9BTE7 237 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 RTL8AQ9BWD3 113 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 MRPL37Q9BZE1 423 aaKnown RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PKIBQ9C010 78 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 OR51B6Q9H340 312 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PLGRKTQ9HBL7 147 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 RAB18Q9NP72 206 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM100Q9NV29 134 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 FAIMQ9NVQ4 179 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 RABL2AQ9UBK7 228 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 RABL2BQ9UNT1 228 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 PEX16Q9Y5Y5 336 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 WNK2Q9Y3S1 2297 aa3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGKV1-27A0A075B6S5 117 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 A0A0A6YYH2 397 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 IGHV7-81A0A0B4J1V7 117 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 A6NIN4 97 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 A6NJ64 397 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 TMEM14DPA8MWL7 114 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 J3QT63 122 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 M0R233 179 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 NOS1APO75052 506 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 CTAG2O75638 210 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 SCGNO76038 276 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 CYB5AP00167 134 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 APOA1P02647 267 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 S100A5P33763 92 aa3.42□□□□□ -1.86
HMGB3P19-201ENST00000403971 CFHR2P36980 270 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms