RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF57Q68EA5 555 aaPredicted RBP8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 Q6ZWC4 215 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 SLC16A13Q7RTY0 426 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 CDH26Q8IXH8 852 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 OR52B4Q8NGK2 314 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 SETD6Q8TBK2 473 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 EDARADDQ8WWZ3 215 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 SRSF12Q8WXF0 261 aaKnown RBP8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 RNF183Q96D59 192 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 CCDC140Q96MF4 163 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 AK3Q9UIJ7 227 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 S4R3C0 116 aa8.79□□□□□ -1
SPTLC1P3-201ENST00000403408 A0A1B0GW64 132 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 FAM223BA6NKX1 122 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 FOXI3A8MTJ6 420 aaPredicted RBP8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 APOA2P02652 100 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 CTRB1P17538 263 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 CAPGP40121 348 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 NANOS2P60321 138 aaKnown RBP8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 C15orf32Q32M92 178 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 CTRB2Q6GPI1 263 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 BTNL8Q6UX41 500 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 UXS1Q8NBZ7 420 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 HARBI1Q96MB7 349 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 NEDD4LQ96PU5 975 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 MYCBPQ99417 103 aaPredicted RBP8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 PHB2Q99623 299 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 SLC29A1Q99808 456 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 TM2D1Q9BX74 207 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 SDHAF2Q9NX18 166 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 UBQLN2Q9UHD9 624 aa8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 RPL36Q9Y3U8 105 aaKnown RBP8.78□□□□□ -1
SPTLC1P3-201ENST00000403408 PNMA8CA0A1B0GUJ8 204 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 E7EUB6 86 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 SOCS1O15524 211 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ATP8B1O43520 1251 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZBTB25P24278 435 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FCGR2BP31994 310 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TAGLNQ01995 201 aaKnown RBP8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TNXAQ16473 311 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 YIF1BQ5BJH7 314 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 UNQ9165/PRO28630Q6UXU0 137 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 GPHB5Q86YW7 130 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CBR4Q8N4T8 237 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TTC9CQ8N5M4 171 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 PYDC1Q8WXC3 89 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF430Q9H8G1 570 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CHMP1AQ9HD42 196 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 Q9N2K0 584 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 RDH8Q9NYR8 311 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CKLFQ9UBR5 152 aa8.77□□□□□ -1.01
SPTLC1P3-201ENST00000403408 HMX3A6NHT5 357 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TMEM14DPA8MWL7 114 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 A8MWP6 167 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TEX22C9J3V5 150 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 GGCTO75223 188 aaKnown RBP8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 C8orf88P0DMB2 117 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 MED14OSP0DP75 135 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TMEM50BP56557 158 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 C1orf146Q5VVC0 180 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CEACAM19Q7Z692 300 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 LRRTM1Q86UE6 522 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 NECAP1Q8NC96 275 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 Q96MT0 163 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF221Q9UK13 617 aa8.76□□□□□ -1.01
SPTLC1P3-201ENST00000403408 LINC00473A8K010 186 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 SHOXO15266 292 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TUSC2O75896 110 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 DCKP27707 260 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 UBE2KP61086 200 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TMPRSS11AQ6ZMR5 421 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 MOB1BQ7L9L4 216 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TEX45Q8NA69 505 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FBLIM1Q8WUP2 373 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 GGHQ92820 318 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 TMEM59Q9BXS4 323 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 LPAR5Q9H1C0 372 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 GHRLQ9UBU3 117 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
SPTLC1P3-201ENST00000403408 LOC100130705A0A1B0GUX0 176 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 IL6RP08887 468 aaPredicted RBP8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 CD37P11049 281 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF124Q15973 351 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ACOT12Q8WYK0 555 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 THRSPQ92748 146 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 OR2D2Q9H210 308 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 FBXL7Q9UJT9 491 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 DIMT1Q9UNQ2 313 aaKnown RBP8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 EXOSC1Q9Y3B2 195 aaKnown RBP8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ORC6Q9Y5N6 252 aa8.74□□□□□ -1.01
SPTLC1P3-201ENST00000403408 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
SPTLC1P3-201ENST00000403408 RTL8CO15255 209 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms