RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 HOGA1Q86XE5 327 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 MINDY2Q8NBR6 621 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 LFNGQ8NES3 379 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 OR13F1Q8NGS4 319 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 UBE2E2Q96LR5 201 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 DCUN1D5Q9BTE7 237 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 VSIG4Q9Y279 399 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 RBMX2Q9Y388 322 aaKnown RBP13.65□□□□□ -0.22
UPK3A-202ENST00000396082 PRELID3BQ9Y3B1 194 aa13.65□□□□□ -0.22
UPK3A-202ENST00000396082 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 MEIS3P1A6NDR6 274 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 LINC00473A8K010 186 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 IGLV2-23P01705 113 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 SMIM18P0DKX4 95 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 PYHIN1Q6K0P9 492 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 ZNF491Q8N8L2 437 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 OR5M8Q8NGP6 311 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 MYOZ3Q8TDC0 251 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 CASTOR1Q8WTX7 329 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 DDB2Q92466 427 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 KCTD12Q96CX2 325 aaKnown RBP13.64□□□□□ -0.23
UPK3A-202ENST00000396082 OR5B12Q96R08 314 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 MRPS7Q9Y2R9 242 aaKnown RBP13.64□□□□□ -0.23
UPK3A-202ENST00000396082 NUBP2Q9Y5Y2 271 aa13.64□□□□□ -0.23
UPK3A-202ENST00000396082 FCGR3BO75015 233 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 FCGR2CP31995 323 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 C19orf54Q5BKX5 351 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 OR2B11Q5JQS5 317 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 OR11H1Q8NG94 326 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 OSR1Q8TAX0 266 aaPredicted RBP13.63□□□□□ -0.23
UPK3A-202ENST00000396082 MRAPQ8TCY5 172 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 GNB4Q9HAV0 340 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 AURKAIP1Q9NWT8 199 aaPredicted RBP13.63□□□□□ -0.23
UPK3A-202ENST00000396082 COMMD3Q9UBI1 195 aa13.63□□□□□ -0.23
UPK3A-202ENST00000396082 SOX15O60248 233 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 EGR2P11161 476 aaPredicted RBP13.62□□□□□ -0.23
UPK3A-202ENST00000396082 AADACP22760 399 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 HOXD3P31249 432 aaPredicted RBP13.62□□□□□ -0.23
UPK3A-202ENST00000396082 TAS2R20P59543 309 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 PJVKQ0ZLH3 352 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 AKIRIN2Q53H80 203 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 TCTEX1D2Q8WW35 142 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 HSD17B10Q99714 261 aaKnown RBP13.62□□□□□ -0.23
UPK3A-202ENST00000396082 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 TAS2R8Q9NYW2 309 aa13.62□□□□□ -0.23
UPK3A-202ENST00000396082 SMIM31A0A1B0GVY4 71 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 SRRM4A7MD48 611 aaKnown RBP13.61□□□□□ -0.23
UPK3A-202ENST00000396082 ARPC1BO15143 372 aaKnown RBP13.61□□□□□ -0.23
UPK3A-202ENST00000396082 PPYP01298 95 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 CRYGBP07316 175 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 TPPP2P59282 170 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 FXYD4P59646 89 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 UBE2KP61086 200 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 OR5AP2Q8NGF4 316 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 SNAPC3Q92966 411 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 MS4A10Q96PG2 267 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 PHB2Q99623 299 aa13.61□□□□□ -0.23
UPK3A-202ENST00000396082 MRPS26Q9BYN8 205 aaKnown RBP13.61□□□□□ -0.23
UPK3A-202ENST00000396082 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
UPK3A-202ENST00000396082 EIF4EP06730 217 aaKnown RBP13.6□□□□□ -0.23
UPK3A-202ENST00000396082 OR8U8P0C7N1 319 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 RORCP51449 518 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 RPL30P62888 115 aaKnown RBP13.6□□□□□ -0.23
UPK3A-202ENST00000396082 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 KIAA0141Q14154 515 aaPredicted RBP13.6□□□□□ -0.23
UPK3A-202ENST00000396082 CDK10Q15131 360 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 TNXAQ16473 311 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 GPR107Q5VW38 600 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 IDO2Q6ZQW0 420 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 TEX45Q8NA69 505 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 ACOT12Q8WYK0 555 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 SLC5A7Q9GZV3 580 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 NAA50Q9GZZ1 169 aaKnown RBP13.6□□□□□ -0.23
UPK3A-202ENST00000396082 SLA2Q9H6Q3 261 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 CCL28Q9NRJ3 127 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 EHFQ9NZC4 300 aa13.6□□□□□ -0.23
UPK3A-202ENST00000396082 I3L521 148 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 ACTL6BO94805 426 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 GABARAPO95166 117 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 APOA1P02647 267 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 TRGV3P03979 118 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 SAA1P0DJI8 122 aaPredicted RBP13.59□□□□□ -0.23
UPK3A-202ENST00000396082 PRSS3P35030 304 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 HERV-K104P61576 105 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 RUNX1Q01196 453 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 FHL3Q13643 280 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 ZNF66Q6ZN08 573 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 OVCH2Q7RTZ1 564 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 GPR141Q7Z602 305 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 OR5T1Q8NG75 326 aa13.59□□□□□ -0.23
UPK3A-202ENST00000396082 TMEM68Q96MH6 324 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms