RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
VAPB-202ENST00000395802 COMMD9Q9P000 198 aa11.12□□□□□ -0.63
VAPB-202ENST00000395802 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 MPTX1A8MV57 137 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 HOXB5P09067 269 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 AKR1C2P52895 323 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 BPIFB3P59826 476 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 ERVK-16P61578 105 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 SELENOHQ8IZQ5 122 aaKnown RBP11.11□□□□□ -0.63
VAPB-202ENST00000395802 SLC35G3Q8N808 338 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 OR5AN1Q8NGI8 311 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 DDB2Q92466 427 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
VAPB-202ENST00000395802 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 NMES1Q9C002 83 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 SLC35D1Q9NTN3 355 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 HSPB11Q9Y547 144 aa11.11□□□□□ -0.63
VAPB-202ENST00000395802 CCDC168Q8NDH2 2452 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 C13orf42A0A1B0GVH6 325 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 HRASP01112 189 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 IGHV4-31P0DP07 118 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 NQO2P16083 231 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 LPAR6P43657 344 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 IFITM2Q01629 132 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 FGL1Q08830 312 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 TPTE2P1Q5T6R2 138 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
VAPB-202ENST00000395802 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 OR4C13Q8NGP0 309 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
VAPB-202ENST00000395802 PPP1R1CQ8WVI7 109 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 ZNRD1Q9P1U0 126 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 CACFD1Q9UGQ2 172 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 WASHC3Q9Y3C0 194 aa11.1□□□□□ -0.63
VAPB-202ENST00000395802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.1□□□□□ -0.632e-8■■■■■ 32.4
VAPB-202ENST00000395802 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 H7C2Y5 167 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 RAMP3O60896 148 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 SLC25A6P12236 298 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 DLX1P56177 255 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 KLRD1Q13241 179 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 ZNF585BQ52M93 769 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 OR2B11Q5JQS5 317 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 GGNBP1Q5YKI7 109 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 ZBTB8BQ8NAP8 495 aaPredicted RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 LHFPL5Q8TAF8 219 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 CENPVL3A0A0U1RRI6 287 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 HMSDA8MTL9 139 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 H0YJW9 148 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 NPFFO15130 113 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 REG1BP48304 166 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 MOB3BQ86TA1 216 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 PDZD9Q8IXQ8 264 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
VAPB-202ENST00000395802 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
VAPB-202ENST00000395802 PDZD2O15018 2839 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 CRYZL1O95825 349 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 PET100P0DJ07 73 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 PRB3Q04118 309 aaPredicted RBP11.08□□□□□ -0.64
VAPB-202ENST00000395802 IL15RAQ13261 267 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
VAPB-202ENST00000395802 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 H2BFWTQ7Z2G1 175 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 MAPK1IP1LQ8NDC0 245 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 DMBX1Q8NFW5 382 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 RNF5Q99942 180 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
VAPB-202ENST00000395802 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 A0A1B0GU03 582 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 KRASP01116 189 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 CD1BP29016 333 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 BRS3P32247 399 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 LGALS7P47929 136 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 VSTM2AQ8TAG5 236 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 R3HDM4Q96D70 268 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 SHOXO15266 292 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 ARPC5O15511 151 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 SNAPC5O75971 98 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 S1PR2O95136 353 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 MPC2O95563 127 aa11.07□□□□□ -0.64
VAPB-202ENST00000395802 SLC25A4P12235 298 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms