RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CACNG7P62955 275 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 TRA2AQ13595 282 aaKnown RBP eCLIP5.7□□□□□ -1.52e-7■■□□□ 14
UBR4-204ENST00000375254 RPL36A-HNRNPH2H7BZ11 118 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 ZNF114Q8NC26 417 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 BAHD1Q8TBE0 780 aaPredicted RBP5.7□□□□□ -1.5
UBR4-204ENST00000375254 FOLR3P41439 243 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 CEACAM21Q3KPI0 293 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 MAFAQ8NHW3 353 aaPredicted RBP5.7□□□□□ -1.5
UBR4-204ENST00000375254 GJB3O75712 270 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 ZNF56Q15929 161 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 WIPI1Q5MNZ9 446 aaPredicted RBP5.7□□□□□ -1.5
UBR4-204ENST00000375254 MRPL20Q9BYC9 149 aaKnown RBP5.7□□□□□ -1.5
UBR4-204ENST00000375254 C1RLQ9NZP8 487 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 WNT6Q9Y6F9 365 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 K7ESF4 209 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 IGLC3P0DOY3 106 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 SRD5A1P18405 259 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 TNFRSF1AP19438 455 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 PSG6Q00889 435 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 C2orf83Q53S99 150 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 ZNF841Q6ZN19 808 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 DEFB125Q8N687 156 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 MRAPQ8TCY5 172 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 ZNF488Q96MN9 340 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 FAM186AA6NE01 2351 aa5.7□□□□□ -1.5
UBR4-204ENST00000375254 TMEM155Q4W5P6 130 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 TMEM177Q53S58 311 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 SFTPA2Q8IWL1 248 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 SFTPA1Q8IWL2 248 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 DUSP15Q9H1R2 295 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 ONECUT1Q9UBC0 465 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 INSIG2Q9Y5U4 225 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PRE2 83 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 CX3CL1P78423 397 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 CENPWQ5EE01 88 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 MBNL2Q5VZF2 373 aaKnown RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 RPP21Q9H633 154 aaKnown RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 CD70P32970 193 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 TGIF1Q15583 401 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 UPK3AO75631 287 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 RTBDNQ9BSG5 229 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 CHAC1Q9BUX1 264 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 RNF115Q9Y4L5 304 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 AHRRA9YTQ3 701 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 CIARTQ8N365 385 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 H3BMM0 161 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 ZXDCQ2QGD7 858 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 UTF1Q5T230 341 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 C16orf52Q8NHV5 167 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 OR2H1Q9GZK4 316 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 THAP10Q9P2Z0 257 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 SETD1AO15047 1707 aaKnown RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 A0A1B0GX78 115 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PPI3 338 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 COX8AP10176 69 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 FGF12P61328 243 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 IFI27L1Q96BM0 104 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 HCRTO43612 131 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 ASPHD2Q6ICH7 369 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 ZNF645Q8N7E2 425 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 IGLV3-16A0A075B6K0 115 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 TEX43Q6ZNM6 134 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 IGLV3-25P01717 112 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 C12orf49Q9H741 205 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 UNC13BO14795 1591 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 SPRY1O43609 319 aaPredicted RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 OR4C3Q8NH37 302 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 PHLDA3Q9Y5J5 127 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PS18 150 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 C9JCJ5 164 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 DXOO77932 396 aaKnown RBP5.69□□□□□ -1.5
UBR4-204ENST00000375254 ZDHHC16Q969W1 377 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 ADGRB3O60242 1522 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 LEPP41159 167 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 SSPNQ14714 243 aa5.69□□□□□ -1.5
UBR4-204ENST00000375254 PRKNO60260 465 aaPredicted RBP5.68□□□□□ -1.5
UBR4-204ENST00000375254 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PQF6 199 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 TMEM88BA6NKF7 163 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 A0A1W2PQD3 144 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 FAM106CPP0CH98 169 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 CLDN2P57739 230 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 FAM106AQ4KMX7 169 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 THSD4Q6ZMP0 1018 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 DRD3P35462 400 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 LAIR2Q6ISS4 152 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 TM2D1Q9BX74 207 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 R4GN57 208 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 H3BQ85 93 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 EAF1Q96JC9 268 aaPredicted RBP5.68□□□□□ -1.5
UBR4-204ENST00000375254 ARHGEF5Q12774 1597 aa5.68□□□□□ -1.5
UBR4-204ENST00000375254 ATG4DQ86TL0 474 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms