RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DDB2Q92466 427 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 ZNF486Q96H40 463 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 SDHCQ99643 169 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 AIFM2Q9BRQ8 373 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 CCDC32Q9BV29 185 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 C16orf95Q9H693 158 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 PLSCR3Q9NRY6 295 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 NF1P21359 2839 aa9.5□□□□□ -0.89
SPTLC1-202ENST00000337841 SHOXO15266 292 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 NBR2O15453 112 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 IL7P13232 177 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 F2RL1P55085 397 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 RPL30P62888 115 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 EIF4EBP1Q13541 118 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 SURF2Q15527 256 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 PHLDA2Q53GA4 152 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 TMEM177Q53S58 311 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 C9orf152Q5JTZ5 239 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 LIN54Q6MZP7 749 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 IDO2Q6ZQW0 420 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 Q6ZSV7 163 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 SPAG16Q8N0X2 631 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 TCTEX1D1Q8N7M0 179 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 NPBQ8NG41 125 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 OR4S2Q8NH73 311 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 OR2T6Q8NHC8 308 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 OSR1Q8TAX0 266 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 MARCH1Q8TCQ1 289 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 RITA1Q96K30 269 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 C7orf50Q9BRJ6 194 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 SLC2A8Q9NY64 477 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 COPZ2Q9P299 210 aa9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 C14orf166Q9Y224 244 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-202ENST00000337841 SVEP1Q4LDE5 3571 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 RRHO14718 337 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 RBFOX2O43251 390 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 PEX14O75381 377 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 SPDEFO95238 335 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 CRYZL1O95825 349 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 HRASP01112 189 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 IGKV1-16P04430 117 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 CTSDP07339 412 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 RELBQ01201 579 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 PLGLAQ15195 96 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 PSG5Q15238 335 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 FBLN7Q53RD9 439 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 Q8N9W7 124 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 CCDC71LQ8N9Z2 235 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 GPHA2Q96T91 129 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 MMP24Q9Y5R2 645 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
SPTLC1-202ENST00000337841 MPPED1O15442 326 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 NDUFA3O95167 84 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 AMY1AP04745 511 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 RLN1P04808 185 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 F2RP25116 425 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 PIGPP57054 158 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 RND3P61587 244 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 TBC1D26Q86UD7 250 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 Q8N2B8 174 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 OR13C8Q8NGS7 320 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 LINC01006Q8NI28 216 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 RBMXL1Q96E39 390 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 SLC2A9Q9NRM0 540 aa9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-202ENST00000337841 TEX13DA0A0J9YY54 714 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 HPRT1P00492 218 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 PI3P19957 117 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 CNTFRP26992 372 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 LPAR6P43657 344 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 C12orf54Q6X4T0 127 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 FAM71E2Q8N5Q1 922 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 TEX45Q8NA69 505 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 RTBDNQ9BSG5 229 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 FBXL15Q9H469 300 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 PLEKHA2Q9HB19 425 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 FAM212BQ9NTI7 297 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 KCNIP3Q9Y2W7 256 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
SPTLC1-202ENST00000337841 SH2D7A6NKC9 451 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 KCNAB3O43448 404 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 SLC25A17O43808 307 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 B3GALNT1O75752 331 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 IGHG2P01859 326 aa9.45□□□□□ -0.9
SPTLC1-202ENST00000337841 SERPINE2P07093 398 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms