RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 NUP50Q9UKX7 468 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 RNF150Q9ULK6 438 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 PPIAL4AQ9Y536 164 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF407Q9C0G0 2248 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 A0A1W2PPR1 153 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 C15orf62A8K5M9 175 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SIRPB1O00241 398 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 CAV2P51636 162 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SELENOVP59797 346 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SPCS3P61009 180 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 AESQ08117 197 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 CATR1Q13166 79 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 MADCAM1Q13477 382 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 TMED4Q7Z7H5 227 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 FGFRL1Q8N441 504 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 NDRG3Q9UGV2 375 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 HRNRQ86YZ3 2850 aaPredicted RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 F8P00451 2351 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 IGHV1-8P0DP01 117 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 S100GP29377 79 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 UBE2KP61086 200 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 C9orf139Q6ZV77 190 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 NABP2Q9BQ15 211 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 TUBA4BQ9H853 241 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 NDUFA4L2Q9NRX3 87 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 FBXL17Q9UF56 701 aa4.36□□□□□ -1.71
PRPF4B-201ENST00000337659 SAA2-SAA4A0A096LPE2 208 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 KANTRA0A1W2PQU2 76 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 VSTM5A8MXK1 200 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 CCSO14618 274 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 PHF1O43189 567 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SAA2P0DJI9 122 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM33P57088 247 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 PLP1P60201 277 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 PRCDQ00LT1 54 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SLC9A3R2Q15599 337 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TEX45Q8NA69 505 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 GNPNAT1Q96EK6 184 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 PATZ1Q9HBE1 687 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 DUSP13Q9UII6 198 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TRAPPC2LQ9UL33 140 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 KPTNQ9Y664 436 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TEX46H3BTG2 121 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 UPK2O00526 184 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ST8SIA5O15466 376 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ADAM20O43506 726 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 BMP5P22003 454 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 CD80P33681 288 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SSTR5P35346 364 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TLE1Q04724 770 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF266Q14584 549 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 BRICD5Q6PL45 260 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 OR4C12Q96R67 309 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TET2Q6N021 2002 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TRGV10A0A0A0MS01 117 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 J3QR06 171 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ARPC5O15511 151 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SYNGR2O43760 224 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 DFFBO76075 338 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SNCAP37840 140 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 NKX2-1P43699 371 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 CEBPDP49716 269 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ATXN7L3Q14CW9 347 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ABCA11PQ4W5N1 156 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 MINOS1Q5TGZ0 78 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 LFNGQ8NES3 379 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 OR5B3Q8NH48 314 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 OR51H1Q8NH63 302 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 RNASE11Q8TAA1 199 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SEC11CQ9BY50 192 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 C19orf12Q9NSK7 152 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 PPP1R3CQ9UQK1 317 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 TBL2Q9Y4P3 447 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 MINOS1-NBL1R4GNA1 71 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ANKRD11Q6UB99 2663 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 SLC31A2O15432 143 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 FBXO24O75426 580 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 IGHV2-5P01817 119 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 GRPP07492 148 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 FOLR2P14207 255 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF44P15621 663 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 CD1BP29016 333 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 FABP6P51161 128 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF124Q15973 351 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 INO80EQ8NBZ0 244 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 OR4S2Q8NH73 311 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 MRGPRDQ8TDS7 321 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 BSCL2Q96G97 398 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 WDR83OSQ9Y284 106 aa4.35□□□□□ -1.71
PRPF4B-201ENST00000337659 A0A1W2PPI3 338 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 RAMP3O60896 148 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PRR20EP86478 221 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PRR20CP86479 221 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms