RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CNIH1O95406 144 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 CD55P08174 381 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 RHOBP62745 196 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 DOK5Q9P104 306 aa10.41□□□□□ -0.74
TM9SF4-201ENST00000217315 A0A0G2JRQ6 117 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 RAB29O14966 203 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 PTBP3O95758 552 aaKnown RBP10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 HES1Q14469 280 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 RPL39P5Q59GN2 51 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF525Q8N782 197 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 OR10A7Q8NGE5 316 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 OR4P4Q8NGL7 312 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 USB1Q9BQ65 265 aaKnown RBP10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 ZDHHC11Q9H8X9 412 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 C16orf97H3BN30 126 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 CYB5R3P00387 301 aaPredicted RBP10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 SMIM6P0DI80 62 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 DEFA4P12838 97 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 KIR2DS2P43631 304 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 RPL31P62899 125 aaKnown RBP10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 SSX2Q16385 188 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 C1orf185Q5T7R7 199 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
TM9SF4-201ENST00000217315 FOXI3A8MTJ6 420 aaPredicted RBP10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 SS18L1O75177 396 aaPredicted RBP10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 EGR1P18146 543 aa10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 OPRK1P41145 380 aa10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 ACSF3Q4G176 576 aaPredicted RBP10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 PRRC2CQ9Y520 2896 aaKnown RBP10.4□□□□□ -0.75
TM9SF4-201ENST00000217315 SEC14L6B5MCN3 397 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 J3QR06 171 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 OTOGLQ3ZCN5 2332 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 WDR82Q6UXN9 313 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 SPCS3P61009 180 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 LRRC75BQ2VPJ9 315 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 MIC13Q5XKP0 118 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 LOC102723971A0A1B0GUV8 181 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 IL15RAQ13261 267 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 Q6ZRM9 215 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 C16orf82Q7Z2V1 217 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 TCTEX1D1Q8N7M0 179 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 LILRB1Q8NHL6 650 aaPredicted RBP10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 DAZAP1Q96EP5 407 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 HARBI1Q96MB7 349 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 QTRT1Q9BXR0 403 aaKnown RBP10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 TUBG2Q9NRH3 451 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
TM9SF4-201ENST00000217315 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 PXMP4Q9Y6I8 212 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 NDUFB4O95168 129 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 THBS3P49746 956 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 TEPPQ6URK8 271 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 C1orf174Q8IYL3 243 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 TMEM18Q96B42 140 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 IGKV1-5P01602 117 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 KIR2DL2P43627 348 aaPredicted RBP10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 PSG5Q15238 335 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 CTDSP1Q9GZU7 261 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 VSIRQ9H7M9 311 aa10.38□□□□□ -0.75
TM9SF4-201ENST00000217315 FAM90A27PA6NNH2 459 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 COLCA2A8K830 154 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 TMEM50AO95807 157 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 TFF3Q07654 80 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 ZNF146Q15072 292 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 BATFQ16520 125 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 ACSM6Q6P461 480 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 PCSK4Q6UW60 755 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 LURAP1Q96LR2 239 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 CISD1Q9NZ45 108 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 SNRPCP09234 159 aaKnown RBP10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 ICAM4Q14773 271 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 PRO1933Q9H354 126 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 JPT1Q9UK76 154 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 TCF19Q9Y242 345 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 LRP4O75096 1905 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 APELAP0DMC3 54 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 GLRXP35754 106 aa10.37□□□□□ -0.75
TM9SF4-201ENST00000217315 LINC00205P59089 165 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms