RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 OR2B11Q5JQS5 317 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 SPAG16Q8N0X2 631 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 CIARTQ8N365 385 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-210ENST00000641115 CD300LFQ8TDQ1 290 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 DPM3Q9P2X0 92 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 TRAV40A0A0B4J280 105 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 HMX3A6NHT5 357 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 TRAPPC2P0DI81 140 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 TRAPPC2BP0DI82 140 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 KIR2DS2P43631 304 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 LINC00205P59089 165 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 DIAPH2-AS1Q14236 149 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 MINOS1Q5TGZ0 78 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 ZNF695Q8IW36 515 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 MRPL20Q9BYC9 149 aaKnown RBP16.08■□□□□ 0.17
PHGDH-210ENST00000641115 FAM212BQ9NTI7 297 aaPredicted RBP16.08■□□□□ 0.17
PHGDH-210ENST00000641115 TBL2Q9Y4P3 447 aaKnown RBP16.08■□□□□ 0.17
PHGDH-210ENST00000641115 MINOS1-NBL1R4GNA1 71 aa16.08■□□□□ 0.17
PHGDH-210ENST00000641115 FCGR3BO75015 233 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 GAPDHP04406 335 aaKnown RBP16.08■□□□□ 0.16
PHGDH-210ENST00000641115 CT45A6P0DMU7 189 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 CT45A5P0DMU8 189 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 CT45A7P0DMV0 189 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 EPHA1P21709 976 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 FCN2Q15485 313 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 TPTE2P1Q5T6R2 138 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 LRTM2Q8N967 370 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 ZNF383Q8NA42 475 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 DDB2Q92466 427 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 TMEM56Q96MV1 263 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 MGAT4CQ9UBM8 478 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 TMEM56-RWDD3S4R434 201 aa16.08■□□□□ 0.16
PHGDH-210ENST00000641115 CENPVL3A0A0U1RRI6 287 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 LY6LH3BQJ8 138 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 CDS2O95674 445 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 APOA2P02652 100 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 SULT1A3P0DMM9 295 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 SULT1A4P0DMN0 295 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 RPA2P15927 270 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 ZNF816Q0VGE8 651 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-210ENST00000641115 GPR157Q5UAW9 335 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 TMEM268Q5VZI3 342 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 CHAC2Q8WUX2 184 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 RBPMSQ93062 196 aaKnown RBP16.07■□□□□ 0.16
PHGDH-210ENST00000641115 IL22RA2Q969J5 263 aa16.07■□□□□ 0.16
PHGDH-210ENST00000641115 DBX1A6NMT0 343 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 GOSR2O14653 212 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 NPFFO15130 113 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 RBFOX2O43251 390 aaKnown RBP eCLIP16.06■□□□□ 0.167e-8■■□□□ 12.4
PHGDH-210ENST00000641115 RAMP3O60896 148 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 TAGLNQ01995 201 aaKnown RBP16.06■□□□□ 0.16
PHGDH-210ENST00000641115 RTL8BQ17RB0 113 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 MIDNQ504T8 468 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 LHFPL4Q7Z7J7 247 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 OR4S2Q8NH73 311 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 LHFPL5Q8TAF8 219 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 NABP2Q9BQ15 211 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 RAB18Q9NP72 206 aa16.06■□□□□ 0.16
PHGDH-210ENST00000641115 IGHV1-69DA0A0B4J2H0 117 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 A8MV72 311 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-210ENST00000641115 IGHV1-69P01742 117 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 SAA4P35542 130 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 LPAR6P43657 344 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 ZNF585BQ52M93 769 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 SLC35G3Q8N808 338 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 OR11H7Q8NGC8 314 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 SLC35D1Q9NTN3 355 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 CSMD1Q96PZ7 3565 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 IGHV1-3A0A0C4DH29 117 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 DUXBA0A1W2PPF3 345 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 OOSP1A8MZH6 123 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 IFNA21P01568 189 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 HOXB5P09067 269 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 RRASP10301 218 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 BRWD1-AS2P59051 145 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 LDLRAD2Q5SZI1 272 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 DHRS7BQ6IAN0 325 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-210ENST00000641115 CCDC144NLQ6NUI1 221 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 SELENOHQ8IZQ5 122 aaKnown RBP16.05■□□□□ 0.16
PHGDH-210ENST00000641115 OR5AN1Q8NGI8 311 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 C18orf12Q96KH6 178 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 HILPDAQ9Y5L2 63 aa16.05■□□□□ 0.16
PHGDH-210ENST00000641115 CCDC168Q8NDH2 2452 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 H0YJW9 148 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 H7C2Y5 167 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 PFDN1O60925 122 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 ADAP1O75689 374 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 ATG12O94817 140 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 HPRT1P00492 218 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 CXCL3P19876 107 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 MC5RP33032 325 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 RAB13P51153 203 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 MOB3BQ86TA1 216 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 AKAP14Q86UN6 197 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 OR8H3Q8N146 312 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 OR5M8Q8NGP6 311 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 RNASE11Q8TAA1 199 aaKnown RBP16.04■□□□□ 0.16
PHGDH-210ENST00000641115 PLEKHA2Q9HB19 425 aa16.04■□□□□ 0.16
PHGDH-210ENST00000641115 IGHV3OR16-10A0A075B7F0 116 aa16.03■□□□□ 0.16
PHGDH-210ENST00000641115 A0A1W2PPI3 338 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms