RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 IGKV1-16P04430 117 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 CHRNA7P36544 502 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 RUNX1Q01196 453 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 KIAA0141Q14154 515 aaPredicted RBP19.63■□□□□ 0.73
VEGFA-230ENST00000640482 C9orf66Q5T8R8 295 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 FLYWCH2Q96CP2 140 aaKnown RBP19.63■□□□□ 0.73
VEGFA-230ENST00000640482 GINS4Q9BRT9 223 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 GNB4Q9HAV0 340 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 SLC35D1Q9NTN3 355 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 FBXO7Q9Y3I1 522 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 RBM7Q9Y580 266 aaKnown RBP19.63■□□□□ 0.73
VEGFA-230ENST00000640482 A3GALT2U3KPV4 340 aa19.63■□□□□ 0.73
VEGFA-230ENST00000640482 LINC00205P59089 165 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 DGCR2P98153 550 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 C19orf54Q5BKX5 351 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 ZNF562Q6V9R5 426 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 Q6ZS49 121 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 CLCC1Q96S66 551 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 NUBP2Q9Y5Y2 271 aa19.62■□□□□ 0.73
VEGFA-230ENST00000640482 I3L521 148 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 SCGNO76038 276 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 OR8U8P0C7N1 319 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 DTYMKP23919 212 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 DCTN2Q13561 401 aaKnown RBP19.61■□□□□ 0.73
VEGFA-230ENST00000640482 PYHIN1Q6K0P9 492 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 PPP1R27Q86WC6 154 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 OR1N2Q8NGR9 330 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.61■□□□□ 0.739e-6■□□□□ 9.4
VEGFA-230ENST00000640482 SDHAF2Q9NX18 166 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 DAPK2Q9UIK4 370 aa19.61■□□□□ 0.73
VEGFA-230ENST00000640482 RAMP3O60896 148 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 CA2P00918 260 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 TAGLNQ01995 201 aaKnown RBP19.6■□□□□ 0.73
VEGFA-230ENST00000640482 ZNF616Q08AN1 781 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 CBX3Q13185 183 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 CDNFQ49AH0 187 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 AKIRIN2Q53H80 203 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 OR5B12Q96R08 314 aa19.6■□□□□ 0.73
VEGFA-230ENST00000640482 RRP15Q9Y3B9 282 aaKnown RBP19.6■□□□□ 0.73
VEGFA-230ENST00000640482 SEC14L6B5MCN3 397 aa19.59■□□□□ 0.73
VEGFA-230ENST00000640482 EGR2P11161 476 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-230ENST00000640482 LUMP51884 338 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-230ENST00000640482 ACTBL2Q562R1 376 aa19.59■□□□□ 0.73
VEGFA-230ENST00000640482 SFXN4Q6P4A7 337 aa19.59■□□□□ 0.73
VEGFA-230ENST00000640482 UNQ5815/PRO19632Q6UWF5 114 aa19.59■□□□□ 0.73
VEGFA-230ENST00000640482 OR51E2Q9H255 320 aa19.59■□□□□ 0.73
VEGFA-230ENST00000640482 SLC25A17O43808 307 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 SOX15O60248 233 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 CD40LGP29965 261 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 LGALS7P47929 136 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 GNB1P62873 340 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 HACD4Q5VWC8 232 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 ARPC1AQ92747 370 aa19.58■□□□□ 0.72
VEGFA-230ENST00000640482 FAM103A1Q9BTL3 118 aaKnown RBP19.58■□□□□ 0.72
VEGFA-230ENST00000640482 ELF5Q9UKW6 265 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-230ENST00000640482 SNRPBP14678 240 aaKnown RBP19.57■□□□□ 0.72
VEGFA-230ENST00000640482 SDC2P34741 201 aa19.57■□□□□ 0.72
VEGFA-230ENST00000640482 PITPNAQ00169 270 aa19.57■□□□□ 0.72
VEGFA-230ENST00000640482 RTL8BQ17RB0 113 aa19.57■□□□□ 0.72
VEGFA-230ENST00000640482 H1FOOQ8IZA3 346 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-230ENST00000640482 LFNGQ8NES3 379 aa19.57■□□□□ 0.72
VEGFA-230ENST00000640482 IGKV1D-8A0A087WSZ0 117 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 RRASP10301 218 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 FXYD3Q14802 87 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 LGALS14Q8TCE9 139 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 ADTRPQ96IZ2 230 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 HARBI1Q96MB7 349 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 ST6GALNAC5Q9BVH7 336 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 DCSTAMPQ9H295 470 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 TPSG1Q9NRR2 321 aa19.56■□□□□ 0.72
VEGFA-230ENST00000640482 CTXN2P0C2S0 81 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 GNG2P59768 71 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 NEDD8Q15843 81 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 ZNF260Q3ZCT1 412 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 KCTD21Q4G0X4 260 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 ASPHD1Q5U4P2 390 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 BVESQ8NE79 360 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 GRPEL2Q8TAA5 225 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 CASTOR1Q8WTX7 329 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 C5orf30Q96GV9 206 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 SLA2Q9H6Q3 261 aa19.55■□□□□ 0.72
VEGFA-230ENST00000640482 LOC100506127A0A0U1RQW1 187 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 TMEM235A6NFC5 223 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 SHOXO15266 292 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 CNIH1O95406 144 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 IGLV2-23P01705 113 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 LGALS1P09382 135 aaKnown RBP19.54■□□□□ 0.72
VEGFA-230ENST00000640482 INSL3P51460 131 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 SCAND1P57086 179 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 MXD1Q05195 221 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 TMEM177Q53S58 311 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 RHBDL2Q9NX52 303 aa19.54■□□□□ 0.72
VEGFA-230ENST00000640482 LINC01619G3V211 115 aa19.53■□□□□ 0.72
VEGFA-230ENST00000640482 ARPC1BO15143 372 aaKnown RBP19.53■□□□□ 0.72
VEGFA-230ENST00000640482 CD36P16671 472 aa19.53■□□□□ 0.72
VEGFA-230ENST00000640482 TPPP2P59282 170 aa19.53■□□□□ 0.72
VEGFA-230ENST00000640482 NUDCD2Q8WVJ2 157 aa19.53■□□□□ 0.72
VEGFA-230ENST00000640482 MS4A10Q96PG2 267 aa19.53■□□□□ 0.72
VEGFA-230ENST00000640482 ALX4Q9H161 411 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-230ENST00000640482 SCOCQ9UIL1 159 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms