RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 VSIG4Q9Y279 399 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 PGLYRP1O75594 196 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 PI3P19957 117 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 S100GP29377 79 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 THBS3P49746 956 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 DYNLT3P51808 116 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 ABCA11PQ4W5N1 156 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 PHLDA2Q53GA4 152 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 RBMS3Q6XE24 437 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 SIGLECL1Q8N7X8 197 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 DRAXINQ8NBI3 349 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 OR5AN1Q8NGI8 311 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 CFHR4Q92496 578 aa15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 ZNF48Q96MX3 618 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 C14orf166Q9Y224 244 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-221ENST00000622702 A0A0A6YYJ9 748 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 TIMM23O14925 209 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 TCRBP04435 133 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 PIGPP57054 158 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 NRARPQ7Z6K4 114 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 MOB3BQ86TA1 216 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 ZNF383Q8NA42 475 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 DUSP18Q8NEJ0 188 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 ENKURQ8TC29 256 aa15.96■□□□□ 0.14
PDLIM2-221ENST00000622702 MDFIC2A0A1B0GVS7 189 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 LINC00473A8K010 186 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 TNFSF12O43508 249 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 VENTXO95231 258 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 BRS3P32247 399 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 LINC00205P59089 165 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 HILS1P60008 231 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 RPL30P62888 115 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 KCTD9Q7L273 389 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 CCDC71LQ8N9Z2 235 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 DDB2Q92466 427 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 GPHA2Q96T91 129 aa15.95■□□□□ 0.14
PDLIM2-221ENST00000622702 FAM90A9PA6NNJ1 464 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 RNF212BA8MTL3 300 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 H0YJW9 148 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 PTTG1O95997 202 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 CD1BP29016 333 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 MC5RP33032 325 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 CATR1Q13166 79 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 LRRC75BQ2VPJ9 315 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 ZFAND2BQ8WV99 257 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 JMJD8Q96S16 334 aa15.94■□□□□ 0.14
PDLIM2-221ENST00000622702 MPPED1O15442 326 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 RLN1P04808 185 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 Q6YL49 198 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 GLDNQ6ZMI3 551 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 TBC1D26Q86UD7 250 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 ZDHHC16Q969W1 377 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 SSX3Q99909 188 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 C20orf85Q9H1P6 137 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 PRELID3BQ9Y3B1 194 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 NUBP2Q9Y5Y2 271 aa15.93■□□□□ 0.14
PDLIM2-221ENST00000622702 APOA2P02652 100 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 F2RP25116 425 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 RAB13P51153 203 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 TMED4Q7Z7H5 227 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 THNSL2Q86YJ6 484 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 CENPSQ8N2Z9 138 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 ADAD2Q8NCV1 583 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 OR51H1Q8NH63 302 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 PIFOQ8TCI5 191 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 TCTEX1D2Q8WW35 142 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 TMEM230Q96A57 120 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 ESM1Q9NQ30 184 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 NUDT15Q9NV35 164 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 FLVCR2Q9UPI3 526 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 WASHC3Q9Y3C0 194 aa15.92■□□□□ 0.14
PDLIM2-221ENST00000622702 IGHV3-72A0A0B4J1Y9 119 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 ARPC1BO15143 372 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 TAS2R31P59538 309 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 EBI3Q14213 229 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 SLC25A42Q86VD7 318 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 PDPNQ86YL7 162 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 TCTEX1D1Q8N7M0 179 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 SLC35D1Q9NTN3 355 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 LIN7CQ9NUP9 197 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 CRYM-AS1A6NIL9 109 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 RBFOX2O43251 390 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 RRASP10301 218 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 KIR2DS2P43631 304 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 IER3P46695 156 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 BRWD1-AS2P59051 145 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 UBE2MP61081 183 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 RTL8BQ17RB0 113 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 RGS21Q2M5E4 152 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 TMEM128Q5BJH2 165 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 MDFIQ99750 246 aa15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 FAM212BQ9NTI7 297 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-221ENST00000622702 B3GALNT1O75752 331 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 SNRNP70P08621 437 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 H2AFB2P0C5Z0 115 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 FAM106CPP0CH98 169 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 AKR1C4P17516 323 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 MECP2P51608 486 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 DHODHQ02127 395 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms