RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ALDH3A1P30838 453 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 MAP2K4P45985 399 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 H2BFSP57053 126 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 SNAP25P60880 206 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 RAB2AP61019 212 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 PSG4Q00888 419 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 RUNX1Q01196 453 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 PRDX4Q13162 271 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 POU6F1Q14863 301 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 JOSD1Q15040 202 aaPredicted RBP1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 CDK10Q15131 360 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 ARHGAP11BQ3KRB8 267 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 FBXL19-AS1Q494R0 122 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 LIN52Q52LA3 116 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 UBE2NLQ5JXB2 153 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 ELP2Q6IA86 826 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 TMEM144Q7Z5S9 345 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 LINC00596Q86U02 117 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 RPRMLQ8N4K4 120 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 EIF4E3Q8N5X7 224 aaKnown RBP1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 FAM57AQ8TBR7 257 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 TWIST2Q8WVJ9 160 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 TNFAIP8L1Q8WVP5 186 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 SLC35B4Q969S0 331 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 PPP1R2P1Q96PQ5 205 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 OR2A7Q96R45 310 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 KIFC1Q9BW19 673 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 EBPLQ9BY08 206 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 GNB1LQ9BYB4 327 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 DCSTAMPQ9H295 470 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 ENY2Q9NPA8 101 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 ARMC1Q9NVT9 282 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 OPTCQ9UBM4 332 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 HHLA2Q9UM44 414 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 POMPQ9Y244 141 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 NDUFAF1Q9Y375 327 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 ZNF780BQ9Y6R6 833 aa1.7□□□□□ -2.14
SCAMP1-205ENST00000614488 IGHV2-26A0A0B4J1V2 119 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 TEX50A0A1B0GTY4 177 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 OR4C46A6NHA9 309 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 EEF1E1-BLOC1S5C9J1V9 151 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 M0QYV0 167 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 GYG2O15488 501 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 EEF1E1O43324 174 aaKnown RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 NOS1APO75052 506 aaPredicted RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 IFNA21P01568 189 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 HBZP02008 142 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 CD79AP11912 226 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 MP68P56378 58 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 DEFA1P59665 94 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 C1QTNF8P60827 252 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 RAB5BP61020 215 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 S100A12P80511 92 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 EMX1Q04741 257 aaPredicted RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 SSX1Q16384 188 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 TMEM241Q24JQ0 296 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ACOT6Q3I5F7 207 aaPredicted RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 LINC00303Q3SY05 128 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ATP6AP1LQ52LC2 224 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 TRMT12Q53H54 448 aaKnown RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 CLLU1OSQ5K130 101 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 C3orf33Q6P1S2 294 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ZNF773Q6PK81 442 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ALKAL1Q6UXT8 129 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 SCGB1D4Q6XE38 83 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 HIST2H3AQ71DI3 136 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 SLC36A1Q7Z2H8 476 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ATP5L2Q7Z4Y8 100 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 MARCH3Q86UD3 253 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 SMIM20Q8N5G0 67 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ZNF676Q8N7Q3 588 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ZIC4Q8N9L1 334 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 OR9I1Q8NGQ6 314 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 ORAOV1Q8WV07 137 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 DCUN1D1Q96GG9 259 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 DIRAS2Q96HU8 199 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 BTF3L4Q96K17 158 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 CMSS1Q9BQ75 279 aaKnown RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 TRIM4Q9C037 500 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 FAM107BQ9H098 131 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 NMNAT1Q9HAN9 279 aaPredicted RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 TAS2R7Q9NYW3 318 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 DOK5Q9P104 306 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 SMPXQ9UHP9 88 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 UTP11Q9Y3A2 253 aaKnown RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 UFC1Q9Y3C8 167 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 MYH2Q9UKX2 1941 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 DOCK5Q9H7D0 1870 aa1.69□□□□□ -2.14
SCAMP1-205ENST00000614488 THOC2Q8NI27 1593 aaKnown RBP1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 DOCK3Q8IZD9 2030 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 DOCK6Q96HP0 2047 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 GMNCA6NCL1 334 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 FAM159BA6NKW6 160 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 GGTLC3B5MD39 225 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 ISLRO14498 428 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 OVOL1O14753 267 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 PSCAO43653 123 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 COX7A2P2O60397 106 aa1.68□□□□□ -2.14
SCAMP1-205ENST00000614488 OR2B3O76000 313 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms