RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
SMN2-213ENST00000614240 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 IFNA6P05013 189 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 LGALS7P47929 136 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 CBX3Q13185 183 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 RDH8Q9NYR8 311 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 HSF4Q9ULV5 492 aa13.65□□□□□ -0.22
SMN2-213ENST00000614240 TRDCB7Z8K6 153 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 AADACP22760 399 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 VEGFCP49767 419 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 MRPS15P82914 257 aaKnown RBP13.64□□□□□ -0.23
SMN2-213ENST00000614240 PJVKQ0ZLH3 352 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 SPHARQ15513 63 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 MED22Q15528 200 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 HAGHQ16775 308 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.64□□□□□ -0.23
SMN2-213ENST00000614240 TMEM203Q969S6 136 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 PHB2Q99623 299 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 FKBP14Q9NWM8 211 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 COA4Q9NYJ1 87 aa13.64□□□□□ -0.23
SMN2-213ENST00000614240 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
SMN2-213ENST00000614240 CDK1P06493 297 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 UCHL1P09936 223 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 DEFA5Q01523 94 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 RAB11BQ15907 218 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 ADAMTSL5Q6ZMM2 481 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 FAM89BQ8N5H3 189 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 FBLIM1Q8WUP2 373 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 ARHGAP5-AS1Q96IT6 56 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 HARBI1Q96MB7 349 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 PECRQ9BY49 303 aa13.63□□□□□ -0.23
SMN2-213ENST00000614240 IGKV1-6A0A0C4DH72 117 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 SLC17A2O00624 439 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 SERPINB10P48595 397 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 RCN1Q15293 331 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 RPEL1Q2QD12 228 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 IL34Q6ZMJ4 242 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 BVESQ8NE79 360 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 OR56B1Q8NGI3 324 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 UFD1Q92890 307 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 TINAGL1Q9GZM7 467 aaPredicted RBP13.62□□□□□ -0.23
SMN2-213ENST00000614240 OR2D2Q9H210 308 aa13.62□□□□□ -0.23
SMN2-213ENST00000614240 AK6Q9Y3D8 172 aaKnown RBP13.62□□□□□ -0.23
SMN2-213ENST00000614240 A0A0B4J203 849 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 BET1O15155 118 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 SHOXO15266 292 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 APELAP0DMC3 54 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 CD37P11049 281 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 TMEM50BP56557 158 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 RTL8BQ17RB0 113 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 LIPKQ5VXJ0 399 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 RNLSQ5VYX0 342 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 Q8N402 240 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 OR4A4PQ8NGN8 299 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
SMN2-213ENST00000614240 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
SMN2-213ENST00000614240 MSGN1A6NI15 193 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 MPPED1O15442 326 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 FABP7O15540 132 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 CSN3P07498 182 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 CD3GP09693 182 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 RANBP1P43487 201 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 CLDN12P56749 244 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
SMN2-213ENST00000614240 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 SNAPC3Q92966 411 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 VCXQ9H320 206 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 ADAM30Q9UKF2 790 aa13.6□□□□□ -0.23
SMN2-213ENST00000614240 LSM2Q9Y333 95 aaKnown RBP13.6□□□□□ -0.23
SMN2-213ENST00000614240 FOXI3A8MTJ6 420 aaPredicted RBP13.59□□□□□ -0.23
SMN2-213ENST00000614240 DENRO43583 198 aaKnown RBP13.59□□□□□ -0.23
SMN2-213ENST00000614240 ARL6IP5O75915 188 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 BRI3O95415 125 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 TRBV12-3P01733 135 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 CRYGBP07316 175 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 RRASP10301 218 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
SMN2-213ENST00000614240 TNXAQ16473 311 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 C2orf76Q3KRA6 126 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 VMA21Q3ZAQ7 101 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 PLAC9Q5JTB6 97 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 FAM3DQ96BQ1 224 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 GFI1Q99684 422 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 SDHAF2Q9NX18 166 aa13.59□□□□□ -0.23
SMN2-213ENST00000614240 JTBO76095 146 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 OR2A4O95047 310 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 RPS25P62851 125 aaKnown RBP13.58□□□□□ -0.24
SMN2-213ENST00000614240 DYRK1AQ13627 763 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 TMEM177Q53S58 311 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 IGSF11Q5DX21 431 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 IL17DQ8TAD2 202 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 SIGLEC8Q9NYZ4 499 aa13.58□□□□□ -0.24
SMN2-213ENST00000614240 SHISA3A0PJX4 238 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms