RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PSG5Q15238 335 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 C19orf54Q5BKX5 351 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 PDPNQ86YL7 162 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 P2RX4Q99571 388 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 PARP11Q9NR21 331 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 FBXO7Q9Y3I1 522 aa14.45□□□□□ -0.1
SHKBP1-202ENST00000593764 TRAV18A0A075B6X5 111 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 A0A0A6YYH2 397 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 A6NJ64 397 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 NUDT19A8MXV4 375 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 PRB2P02812 416 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 CRIP2P52943 208 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 RPS16P62249 146 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 KIAA0141Q14154 515 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 ZNF660Q6AZW8 331 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 MINDY2Q8NBR6 621 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 MYOZ3Q8TDC0 251 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 RAX2Q96IS3 184 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 KLK15Q9H2R5 256 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 SLC35D1Q9NTN3 355 aa14.44□□□□□ -0.1
SHKBP1-202ENST00000593764 TRAV41A0A0B4J266 112 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 IGLV1-40P01703 118 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 IGLV2-23P01705 113 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 APOA2P02652 100 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 CTXN2P0C2S0 81 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 MYCNOSP40205 109 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 PLGLAQ15195 96 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 FOXB2Q5VYV0 432 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 CNIH2Q6PI25 160 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 CROCCP3Q8IVE0 287 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 FLYWCH2Q96CP2 140 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 DUX3Q96PT4 197 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 TSNAXQ99598 290 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 FUNDC2Q9BWH2 189 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 METTL1Q9UBP6 276 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 RBM7Q9Y580 266 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 NUBP2Q9Y5Y2 271 aa14.43□□□□□ -0.1
SHKBP1-202ENST00000593764 SPDEFO95238 335 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 HLA-DQB1P01920 261 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 NFYAP23511 347 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 ZNF562Q6V9R5 426 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 GVQW1Q8N7I0 195 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 DDB2Q92466 427 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 RCC1LQ96I51 464 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 CLCC1Q96S66 551 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 AUNIPQ9H7T9 357 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 DIABLOQ9NR28 239 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 TPSG1Q9NRR2 321 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 ANXA10Q9UJ72 324 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 OR2W1Q9Y3N9 320 aa14.42□□□□□ -0.1
SHKBP1-202ENST00000593764 SRRM4A7MD48 611 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 LINC00473A8K010 186 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 J3QRK9 145 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 CCL24O00175 119 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 SOX15O60248 233 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 CRYGBP07316 175 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 SMIM18P0DKX4 95 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 PTHLHP12272 177 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 DUTP33316 252 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 TAGLNQ01995 201 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 DEFB136Q30KP8 78 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 BVESQ8NE79 360 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 OR13F1Q8NGS4 319 aa14.41□□□□□ -0.1
SHKBP1-202ENST00000593764 IGKV1D-13A0A0B4J2D9 117 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 XRCC3O43542 346 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 SLC25A17O43808 307 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 TUSC2O75896 110 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 IGLV2-14P01704 120 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 IGKV1-13P0DP09 117 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 LGALS7P47929 136 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 RAB9AP51151 201 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 LUMP51884 338 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 NCS1P62166 190 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 SSBP2P81877 361 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 TMEM177Q53S58 311 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 HOGA1Q86XE5 327 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 ZNF491Q8N8L2 437 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 C4orf3Q8WVX3 66 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 SLC25A46Q96AG3 418 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
SHKBP1-202ENST00000593764 ARPC1BO15143 372 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 DUS4LO95620 317 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 CA2P00918 260 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 VBP1P61758 197 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 PJVKQ0ZLH3 352 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 ECSCRQ19T08 205 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 TMEM65Q6PI78 240 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 ZNF645Q8N7E2 425 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 BEST4Q8NFU0 473 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 ADTRPQ96IZ2 230 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 UBE2E2Q96LR5 201 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 FAM103A1Q9BTL3 118 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 A3GALT2U3KPV4 340 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 TNCP24821 2201 aa14.39□□□□□ -0.11
SHKBP1-202ENST00000593764 A0A1W2PN81 502 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 I3L521 148 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 RRASP10301 218 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 CHRNA7P36544 502 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 RTL8BQ17RB0 113 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 MRGPRG-AS1Q2M3A8 158 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms