RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 IMP3Q9NV31 184 aaKnown RBP1.92□□□□□ -2.1
LINC00557-201ENST00000563184 THSD7AQ9UPZ6 1657 aa1.92□□□□□ -2.1
LINC00557-201ENST00000563184 A0A1W2PP64 1363 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 ZNF728P0DKX0 622 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 HIST1H1CP16403 213 aaKnown RBP1.91□□□□□ -2.1
LINC00557-201ENST00000563184 LRRC34Q8IZ02 419 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 OR4X1Q8NH49 305 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 RNASE6Q93091 150 aaKnown RBP1.91□□□□□ -2.1
LINC00557-201ENST00000563184 CPNE2Q96FN4 548 aaPredicted RBP1.91□□□□□ -2.1
LINC00557-201ENST00000563184 ZNF625Q96I27 306 aaPredicted RBP1.91□□□□□ -2.1
LINC00557-201ENST00000563184 NDUFB11Q9NX14 153 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 EMC3Q9P0I2 261 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 CR1P17927 2039 aa1.91□□□□□ -2.1
LINC00557-201ENST00000563184 NAV1Q8NEY1 1877 aa1.9□□□□□ -2.1
LINC00557-201ENST00000563184 NUMA1Q14980 2115 aa1.9□□□□□ -2.1
LINC00557-201ENST00000563184 IGLV3-9A0A075B6K5 115 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 ZNF860A6NHJ4 632 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 STX10O60499 249 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 HPGDSO60760 199 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 CASQ1P31415 396 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 XCL1P47992 114 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 CDK9P50750 372 aaKnown RBP1.9□□□□□ -2.11
LINC00557-201ENST00000563184 RPL14P50914 215 aaKnown RBP1.9□□□□□ -2.11
LINC00557-201ENST00000563184 FABP5Q01469 135 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 PRDX4Q13162 271 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 GNA13Q14344 377 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 SPATA12Q7Z6I5 190 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 BAP18Q8IXM2 172 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 DAND5Q8N907 189 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 OR4X2Q8NGF9 303 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 CLDND2Q8NHS1 167 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 RPS4Y2Q8TD47 263 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 DNAJB3Q8WWF6 145 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 ASB13Q8WXK3 278 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 DCUN1D5Q9BTE7 237 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 RTEL1-TNFRSF6BF6WH68 1400 aa1.9□□□□□ -2.11
LINC00557-201ENST00000563184 COCHO43405 550 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 NDUFB2O95178 105 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 OCMP0CE72 109 aaPredicted RBP1.89□□□□□ -2.11
LINC00557-201ENST00000563184 PEBP1P30086 187 aaKnown RBP1.89□□□□□ -2.11
LINC00557-201ENST00000563184 IFNGR2P38484 337 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 CD79BP40259 229 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 LGALS9BQ3B8N2 356 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 PDPK2PQ6A1A2 396 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 PACRGLQ8N7B6 248 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 MRPS24Q96EL2 167 aaKnown RBP1.89□□□□□ -2.11
LINC00557-201ENST00000563184 SLC35G5Q96KT7 338 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 PACRGQ96M98 296 aaPredicted RBP1.89□□□□□ -2.11
LINC00557-201ENST00000563184 MIEN1Q9BRT3 115 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 TIPINQ9BVW5 301 aa1.89□□□□□ -2.11
LINC00557-201ENST00000563184 PCYT1BQ9Y5K3 369 aaPredicted RBP1.89□□□□□ -2.11
LINC00557-201ENST00000563184 DICER1Q9UPY3 1922 aaKnown RBP1.88□□□□□ -2.11
LINC00557-201ENST00000563184 TEX50A0A1B0GTY4 177 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 ARRDC5A6NEK1 342 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 UBE2L6O14933 153 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 BIRC5O15392 142 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 TMEM33P57088 247 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 MGAT3Q09327 533 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 SPACA4Q8TDM5 124 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 SMIM19Q96E16 107 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 TIMM21Q9BVV7 248 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 CRCT1Q9UGL9 99 aa1.88□□□□□ -2.11
LINC00557-201ENST00000563184 KLK5Q9Y337 293 aaPredicted RBP1.88□□□□□ -2.11
LINC00557-201ENST00000563184 A0A1W2PQD3 144 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 F5H768 121 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 MT-CO2P00403 227 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 IL6P05231 212 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 UGT2B7P16662 529 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 CD24P25063 80 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 HINT1P49773 126 aaPredicted RBP1.87□□□□□ -2.11
LINC00557-201ENST00000563184 RBM11P57052 281 aaKnown RBP1.87□□□□□ -2.11
LINC00557-201ENST00000563184 TAS2R30P59541 319 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 RPS24P62847 133 aaKnown RBP1.87□□□□□ -2.11
LINC00557-201ENST00000563184 SMCR5Q8TEV8 140 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 MS4A6EQ96DS6 147 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 SFRP2Q96HF1 295 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 DERL2Q9GZP9 239 aa1.87□□□□□ -2.11
LINC00557-201ENST00000563184 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 TMED7-TICAM2A0A0A6YYA0 188 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 OR6C6A6NF89 314 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 C2orf74A8MZ97 194 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 ITGB1BP1O14713 200 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 BTN3A2P78410 334 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 HLA-DRB3P79483 266 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 ZNF90Q03938 601 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 JOSD1Q15040 202 aaPredicted RBP1.86□□□□□ -2.11
LINC00557-201ENST00000563184 PLEKHG7Q6ZR37 379 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 Q6ZRN7 208 aaPredicted RBP1.86□□□□□ -2.11
LINC00557-201ENST00000563184 WDR90Q96KV7 1748 aa1.86□□□□□ -2.11
LINC00557-201ENST00000563184 J3QQQ9 107 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 CXCR4P61073 352 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 RPL26P61254 145 aaKnown RBP1.85□□□□□ -2.11
LINC00557-201ENST00000563184 EBPQ15125 230 aaKnown RBP1.85□□□□□ -2.11
LINC00557-201ENST00000563184 Q6ZS52 159 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 Q6ZTI0 123 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 LHFPL1Q86WI0 220 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 TMEM251Q8N6I4 163 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 TMEM109Q9BVC6 243 aa1.85□□□□□ -2.11
LINC00557-201ENST00000563184 SPANXB1Q9NS25 103 aaPredicted RBP1.85□□□□□ -2.11
LINC00557-201ENST00000563184 PLEKHJ1Q9NW61 149 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms