RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 ACSM3Q53FZ2 586 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 MS4A15Q8N5U1 240 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 CYGBQ8WWM9 190 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 SLC35D1Q9NTN3 355 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 PEMTQ9UBM1 199 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 AK3Q9UIJ7 227 aa18.4■□□□□ 0.54
FOXA1-204ENST00000554607 TMEM14DPA8MWL7 114 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 OR2A4O95047 310 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 LINC00205P59089 165 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 LINC00322Q6ZN03 302 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-204ENST00000554607 LRRTM1Q86UE6 522 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.39■□□□□ 0.53
FOXA1-204ENST00000554607 BVESQ8NE79 360 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 SNAPC3Q92966 411 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 URM1Q9BTM9 101 aaKnown RBP18.39■□□□□ 0.53
FOXA1-204ENST00000554607 HIPK2Q9H2X6 1198 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 Q9N2K0 584 aa18.39■□□□□ 0.53
FOXA1-204ENST00000554607 M0R1X1 148 aa18.38■□□□□ 0.53
FOXA1-204ENST00000554607 AIREO43918 545 aa18.38■□□□□ 0.53
FOXA1-204ENST00000554607 SCTP09683 121 aa18.38■□□□□ 0.53
FOXA1-204ENST00000554607 SSBP2P81877 361 aaPredicted RBP18.38■□□□□ 0.53
FOXA1-204ENST00000554607 QRFPP83859 136 aa18.38■□□□□ 0.53
FOXA1-204ENST00000554607 RBM48Q5RL73 367 aaKnown RBP18.38■□□□□ 0.53
FOXA1-204ENST00000554607 COA4Q9NYJ1 87 aa18.38■□□□□ 0.53
FOXA1-204ENST00000554607 A0A0B4J203 849 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 IGLV2-23P01705 113 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 CRYGBP07316 175 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 MECP2P51608 486 aaKnown RBP18.37■□□□□ 0.53
FOXA1-204ENST00000554607 PJVKQ0ZLH3 352 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 LAX1Q8IWV1 398 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 NANOGP1Q8N7R0 232 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 HDHD3Q9BSH5 251 aaPredicted RBP18.37■□□□□ 0.53
FOXA1-204ENST00000554607 RETNQ9HD89 108 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 C12orf4Q9NQ89 552 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 ADAM30Q9UKF2 790 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 HSF4Q9ULV5 492 aa18.37■□□□□ 0.53
FOXA1-204ENST00000554607 A0A0A6YYD4 124 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 IZUMO1RA6ND01 250 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 SOCS1O15524 211 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 TPPPO94811 219 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 TRBV12-3P01733 135 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 SRMP19623 302 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 CD81P60033 236 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 TAGLNQ01995 201 aaKnown RBP18.36■□□□□ 0.53
FOXA1-204ENST00000554607 CBX3Q13185 183 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 DYRK1AQ13627 763 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 INSL4Q14641 139 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 OR6M1Q8NGM8 313 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 LPAR5Q9H1C0 372 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 KCNK15Q9H427 330 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 PLEKHA3Q9HB20 300 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 SLC2A8Q9NY64 477 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 RDH8Q9NYR8 311 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 PSORS1C1Q9UIG5 152 aa18.36■□□□□ 0.53
FOXA1-204ENST00000554607 CD37P11049 281 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 SERPINB10P48595 397 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 FAM89BQ8N5H3 189 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 DHRSXQ8N5I4 330 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 HARBI1Q96MB7 349 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 PHB2Q99623 299 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 NEURL2Q9BR09 285 aa18.35■□□□□ 0.53
FOXA1-204ENST00000554607 DEFA5Q01523 94 aa18.34■□□□□ 0.53
FOXA1-204ENST00000554607 HSD17B12Q53GQ0 312 aa18.34■□□□□ 0.53
FOXA1-204ENST00000554607 AHSA2Q719I0 299 aa18.34■□□□□ 0.53
FOXA1-204ENST00000554607 FAM110AQ9BQ89 295 aa18.34■□□□□ 0.53
FOXA1-204ENST00000554607 C8orf4Q9NR00 106 aa18.34■□□□□ 0.53
FOXA1-204ENST00000554607 TRDCB7Z8K6 153 aa18.33■□□□□ 0.52
FOXA1-204ENST00000554607 SHOXO15266 292 aa18.33■□□□□ 0.52
FOXA1-204ENST00000554607 CMSS1Q9BQ75 279 aaKnown RBP18.33■□□□□ 0.52
FOXA1-204ENST00000554607 PLCXD1Q9NUJ7 323 aa18.33■□□□□ 0.52
FOXA1-204ENST00000554607 IGKV1-6A0A0C4DH72 117 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 MSGN1A6NI15 193 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 OR9G9P0C7N8 305 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 RTL8BQ17RB0 113 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 TMEM177Q53S58 311 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 CEACAM19Q7Z692 300 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 ADAD2Q8NCV1 583 aaKnown RBP18.32■□□□□ 0.52
FOXA1-204ENST00000554607 ALMS1Q8TCU4 4167 aa18.32■□□□□ 0.52
FOXA1-204ENST00000554607 FAM223BA6NKX1 122 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 RRASP10301 218 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 TMEM50BP56557 158 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 CD300EQ496F6 205 aaPredicted RBP18.31■□□□□ 0.52
FOXA1-204ENST00000554607 RNLSQ5VYX0 342 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 FAM223AQ8IWN6 122 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 C8orf59Q8N0T1 100 aaPredicted RBP18.31■□□□□ 0.52
FOXA1-204ENST00000554607 PACRGLQ8N7B6 248 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 OR4A4PQ8NGN8 299 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 SDHAF2Q9NX18 166 aa18.31■□□□□ 0.52
FOXA1-204ENST00000554607 ZNF785A8K8V0 405 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 FOXI3A8MTJ6 420 aaPredicted RBP18.3■□□□□ 0.52
FOXA1-204ENST00000554607 MPPED1O15442 326 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 APELAP0DMC3 54 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 ATP5G2Q06055 141 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 VMA21Q3ZAQ7 101 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 TEX45Q8NA69 505 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 DYNLRB2Q8TF09 96 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 ARHGAP5-AS1Q96IT6 56 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 MND1Q9BWT6 205 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 PECRQ9BY49 303 aa18.3■□□□□ 0.52
FOXA1-204ENST00000554607 OR2D2Q9H210 308 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms