RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 GATAD1Q8WUU5 269 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 C6orf106Q9H6K1 298 aaPredicted RBP7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 USP54Q70EL1 1684 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PPM0 123 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 PITX3O75364 302 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 GPX1P07203 203 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 WFDC2Q14508 124 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF519Q8TB69 540 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM174Q8WUU8 243 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 PLD4Q96BZ4 506 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 GRAMD2BQ96HH9 432 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 LRP6O75581 1613 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 CYBAP13498 195 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 MIA3Q5JRA6 1907 aa7.75□□□□□ -1.17
GTF2A1-203ENST00000553612 AMY1AP04745 511 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 NPPBP16860 134 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SSBP2P81877 361 aaPredicted RBP7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 PRDX1Q06830 199 aaKnown RBP7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 KLHDC7BQ96G42 594 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 C5orf66Q9H5L9 145 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SAP30LQ9HAJ7 183 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 RP1P56715 2156 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 REG1BP48304 166 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 ZP4Q12836 540 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 ZPLD1Q8TCW7 415 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 NAT6Q93015 286 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 KCNK17Q96T54 332 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 TRBV5-3A0A0A0MS03 114 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SMIM17P0DL12 118 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SLC38A11Q08AI6 406 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 GPR82Q96P67 336 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 J3KT08 172 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SELPP16109 830 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 NPEPL1Q8NDH3 523 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 RDH5Q92781 318 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 VPREB3Q9UKI3 123 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 KLF12Q9Y4X4 402 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 ARFGEF2Q9Y6D5 1785 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM150CB9EJG8 249 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 SEC61GP60059 68 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 CYP2G1PQ6ZSU1 146 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 DEFB125Q8N687 156 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 CFHR5Q9BXR6 569 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 RETNQ9HD89 108 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 PRTFDC1Q9NRG1 225 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 PHPT1Q9NRX4 125 aaPredicted RBP7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM30AQ9NV96 361 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 EPDR1Q9UM22 224 aa7.74□□□□□ -1.17
GTF2A1-203ENST00000553612 FABP5P3A8MUU1 101 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 TNFSF11O14788 317 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 PIN1P1O15428 100 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF718Q3SXZ3 478 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 SLC25A30Q5SVS4 291 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 EAF1Q96JC9 268 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ITGBL1O95965 494 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 CDAP32320 146 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 RPS20P60866 119 aaKnown RBP7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 MORN2Q502X0 79 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM178AQ8NBL3 297 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 VN1R2Q8NFZ6 395 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 OSR1Q8TAX0 266 aaPredicted RBP7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 OR1C1Q15619 314 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ABHD17CQ6PCB6 329 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 RAX2Q96IS3 184 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ANKRD10Q9NXR5 420 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 PTPRFP10586 1907 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 H3BRM9 83 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 TNFRSF1AP19438 455 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 GUSBP1Q15486 140 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 PELI2Q9HAT8 420 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 RPRMQ9NS64 109 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 CSDC2Q9Y534 153 aaKnown RBP7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 TNFRSF18Q9Y5U5 241 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 OPRK1P41145 380 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF585BQ52M93 769 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 SFXN3Q9BWM7 321 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 DIP2BQ9P265 1576 aa7.73□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNHIT1O43257 154 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 FOXH1O75593 365 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 IGHV3-13P01766 116 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 IGHV3-7P01780 117 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 HHEXQ03014 270 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 BCL6BQ8N143 479 aaPredicted RBP7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 SSMEM1Q8WWF3 244 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 OR2H1Q9GZK4 316 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms