RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CDX1P47902 265 aaPredicted RBP19.47■□□□□ 0.71
FOXA1-202ENST00000545425 LCN15Q6UWW0 184 aa19.47■□□□□ 0.71
FOXA1-202ENST00000545425 OR10P1Q8NGE3 313 aa19.47■□□□□ 0.71
FOXA1-202ENST00000545425 TRIB1Q96RU8 372 aa19.47■□□□□ 0.71
FOXA1-202ENST00000545425 TINAGQ9UJW2 476 aa19.47■□□□□ 0.71
FOXA1-202ENST00000545425 DNAJC13O75165 2243 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 ZFP92A6NM28 416 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 SPINT2O43291 252 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 IGLV1-44P01699 117 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 MPV17P39210 176 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 ERVS71-1P61550 626 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 AARDQ4LEZ3 155 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 PPP1R35Q8TAP8 253 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 NAT8Q9UHE5 227 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 TRBV24-1A0A075B6N3 115 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 C17orf112F2Z3M2 114 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 GCH1P30793 250 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 GNB2P62879 340 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 ZNF674Q2M3X9 581 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 ALKBH6Q3KRA9 238 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 WDR82Q6UXN9 313 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 NANPQ8TBE9 248 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 LHX4Q969G2 390 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 PLSCR4Q9NRQ2 329 aa19.46■□□□□ 0.71
FOXA1-202ENST00000545425 UBE2L5PA0A1B0GUS4 154 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 ODAMA1E959 279 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 TIMM8AO60220 97 aaPredicted RBP19.45■□□□□ 0.7
FOXA1-202ENST00000545425 PSMB3P49720 205 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 RPP30P78346 268 aaKnown RBP19.45■□□□□ 0.7
FOXA1-202ENST00000545425 P2RY6Q15077 328 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 TMEM249Q2WGJ8 235 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 H2BFWTQ7Z2G1 175 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 DTD1Q8TEA8 209 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 COQ2Q96H96 371 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 ACTR3CQ9C0K3 210 aaPredicted RBP19.45■□□□□ 0.7
FOXA1-202ENST00000545425 RAB9BQ9NP90 201 aa19.45■□□□□ 0.7
FOXA1-202ENST00000545425 ZNF727A8MUV8 499 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 AHRRA9YTQ3 701 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 SEC14L6B5MCN3 397 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 ZNF737O75373 536 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 FBP1P09467 338 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 KIR2DL2P43627 348 aaPredicted RBP19.44■□□□□ 0.7
FOXA1-202ENST00000545425 TBR1Q16650 682 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 DNLZQ5SXM8 178 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 CYP2G1PQ6ZSU1 146 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 NCOR1P1Q9H4R4 102 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 MED12LQ86YW9 2145 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 NKX2-8O15522 239 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 CLN5O75503 358 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 SFTPCP11686 197 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 GZMHP20718 246 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 CFHR2P36980 270 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 GABRA2P47869 451 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 MEF2BQ02080 365 aaPredicted RBP19.44■□□□□ 0.7
FOXA1-202ENST00000545425 ZNF709Q8N972 641 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 VSIRQ9H7M9 311 aa19.44■□□□□ 0.7
FOXA1-202ENST00000545425 PMS2P5A8MQ11 134 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 CEBPZOSA8MTT3 80 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 FABP1P07148 127 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 CD81P60033 236 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 ERVFRD-1P60508 538 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 OR52L2PQ8NGH6 319 aa19.43■□□□□ 0.7
FOXA1-202ENST00000545425 MED13Q9UHV7 2174 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 RBFOX2O43251 390 aaKnown RBP eCLIP19.42■□□□□ 0.7
FOXA1-202ENST00000545425 PTBP3O95758 552 aaKnown RBP19.42■□□□□ 0.7
FOXA1-202ENST00000545425 KRASP01116 189 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 G6PCP35575 357 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 RPL30P62888 115 aaKnown RBP19.42■□□□□ 0.7
FOXA1-202ENST00000545425 AESQ08117 197 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 CR1LQ2VPA4 569 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 FAM210BQ96KR6 192 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 DIRC2Q96SL1 478 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 GGACTQ9BVM4 153 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 NIT2Q9NQR4 276 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 JPT1Q9UK76 154 aa19.42■□□□□ 0.7
FOXA1-202ENST00000545425 SMCO3A2RU48 225 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 MPDU1O75352 247 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 KBTBD11O94819 623 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 S1PR2O95136 353 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 CXCL1P09341 107 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 S100A2P29034 98 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 LY6DQ14210 128 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 C3orf36Q3SXR2 165 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 WDR25Q64LD2 544 aaPredicted RBP19.41■□□□□ 0.7
FOXA1-202ENST00000545425 OR8G2PQ6IF36 304 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 CNEP1R1Q8N9A8 125 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 CYB5BO43169 146 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 RAMP3O60896 148 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 WISP2O76076 250 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 CECR9P0C854 216 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 MDKP21741 143 aaPredicted RBP19.41■□□□□ 0.7
FOXA1-202ENST00000545425 KIR2DS2P43631 304 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 COL10A1Q03692 680 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 ATP1A1-AS1Q5TC04 95 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 SLC16A13Q7RTY0 426 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 GCNT2Q8N0V5 402 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 RPP25LQ8N5L8 163 aaKnown RBP19.41■□□□□ 0.7
FOXA1-202ENST00000545425 OR52E5Q8NH55 327 aa19.41■□□□□ 0.7
FOXA1-202ENST00000545425 ITGB1BP1O14713 200 aa19.4■□□□□ 0.7
FOXA1-202ENST00000545425 PRB1P04280 392 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms