RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 LIM2P55344 173 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RIPPLY3P57055 190 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 S100A10P60903 97 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 UBE2KP61086 200 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RHOBP62745 196 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 HSD52Q0P140 79 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 PLCXD2Q0VAA5 305 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 DHRS2Q13268 280 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 GNMTQ14749 295 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KIR2DS1Q14954 304 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SSX1Q16384 188 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 GABRA6Q16445 453 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SNRNP35Q16560 246 aaKnown RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 DMRTC1Q5HYR2 192 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 BCL2L15Q5TBC7 163 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OLFML2AQ68BL7 652 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 STUMQ69YW2 141 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZFAND6Q6FIF0 208 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR2T2Q6IF00 324 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LAIR2Q6ISS4 152 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TEX43Q6ZNM6 134 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 MOB1BQ7L9L4 216 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZNF584Q8IVC4 421 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR8I2Q8N0Y5 310 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR2L13Q8N349 312 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KCNRGQ8N5I3 272 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 FAM24BQ8N5W8 94 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 EID2Q8N6I1 236 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 CD177Q8N6Q3 437 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZNF676Q8N7Q3 588 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 INO80EQ8NBZ0 244 aaPredicted RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 PLPP5Q8NEB5 264 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR51A2Q8NGJ7 313 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR5D16Q8NGK9 328 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR10G4Q8NGN3 311 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR1N2Q8NGR9 330 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 KIR2DL5BQ8NHK3 375 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 NEIL3Q8TAT5 605 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 FAM110BQ8TC76 370 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SFXN5Q8TD22 340 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ZNF675Q8TD23 568 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RAB8BQ92930 207 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 APOBEC3DQ96AK3 386 aaPredicted RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 C8orf44Q96CB5 159 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 DNAJC19Q96DA6 116 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 OR4K3Q96R72 315 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 MBOAT4Q96T53 435 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TAPBPLQ9BX59 468 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 CDCA4Q9BXL8 241 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SPANXDQ9BXN6 97 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RSPO3Q9BXY4 272 aaPredicted RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 C20orf27Q9GZN8 174 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 GABARAPL1Q9H0R8 117 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RNF167Q9H6Y7 350 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 RBM22Q9NW64 420 aaKnown RBP eCLIP2.44□□□□□ -2.02
USP28-210ENST00000542033 CLN6Q9NWW5 311 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 FKBP11Q9NYL4 201 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SLC23A2Q9UGH3 650 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 NAT8BQ9UHF3 227 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 SHPKQ9UHJ6 478 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 MMP17Q9ULZ9 603 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 BOKQ9UMX3 212 aaPredicted RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 HS3ST2Q9Y278 367 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 VSIG4Q9Y279 399 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 LAMTOR2Q9Y2Q5 125 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TIAM2Q8IVF5 1701 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TDRD15B5MCY1 1934 aaKnown RBP2.44□□□□□ -2.02
USP28-210ENST00000542033 DIP2BQ9P265 1576 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 C3P01024 1663 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 TOPAZ1Q8N9V7 1692 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ARFGEF2Q9Y6D5 1785 aa2.44□□□□□ -2.02
USP28-210ENST00000542033 ANKRD31Q8N7Z5 1873 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ABCA3Q99758 1704 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CITO14578 2027 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A0G2JMM0 328 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 CENPVL3A0A0U1RRI6 287 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1B0GW64 132 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1B0GWB2 263 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1B0GX51 115 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PPB8 328 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PRD5 423 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PRE2 83 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PRF3 423 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 A0A1W2PRM7 423 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 MAP1LC3B2A6NCE7 125 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 FAM159BA6NKW6 160 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 KIR3DP1A8MWS1 328 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 E7EQ34 232 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 F5H768 121 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 H7BYZ3 331 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 K7ENP7 123 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 K7EPK0 472 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 DCTN6O00399 190 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 GABRPO00591 440 aa2.43□□□□□ -2.02
USP28-210ENST00000542033 ZNF207O43670 478 aaKnown RBP2.43□□□□□ -2.02
USP28-210ENST00000542033 CREBL2O60519 120 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms