RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 A0A1W2PQM1 296 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 C5orf49A4QMS7 147 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 KRASP01116 189 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 BRS3P32247 399 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 ZNF497Q6ZNH5 498 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 CCDC74BQ96LY2 380 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 PLA2G3Q9NZ20 509 aa14.82□□□□□ -0.04
RAB40C-205ENST00000539661 A0A1B0GUS0 222 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 ANKRD30BLA7E2S9 258 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 UMODP07911 640 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 ARF1P84077 181 aaKnown RBP14.81□□□□□ -0.04
RAB40C-205ENST00000539661 Q6ZWC4 215 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 DTD1Q8TEA8 209 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 HLA-CQ95604 372 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 ZDHHC11Q9H8X9 412 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 BDP1A6H8Y1 2624 aa14.81□□□□□ -0.04
RAB40C-205ENST00000539661 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
RAB40C-205ENST00000539661 NDUFB4O95168 129 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 NPSP0C0P6 89 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 PLA2G5P39877 138 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 OR1L1Q8NH94 360 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 LPAR2Q9HBW0 351 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 MBNL3Q9NUK0 354 aaKnown RBP14.8□□□□□ -0.04
RAB40C-205ENST00000539661 CLN8Q9UBY8 286 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 TRAPPC2LQ9UL33 140 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 P04436 131 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 KITLGP21583 273 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 GUSBP11Q6P575 273 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 WIPI2Q9Y4P8 454 aa14.8□□□□□ -0.04
RAB40C-205ENST00000539661 ODAMA1E959 279 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 SLC23A3Q6PIS1 610 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 ZNF645Q8N7E2 425 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 AGBL5Q8NDL9 886 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 ABHD3Q8WU67 409 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 VAMP8Q9BV40 100 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 MRPL33O75394 65 aaKnown RBP14.79□□□□□ -0.04
RAB40C-205ENST00000539661 ATP5G3P48201 142 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 PRR18Q8N4B5 295 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 OR2J1Q9GZK6 312 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 TP53TG3Q9ULZ0 132 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 IGKV3D-15A0A087WSY6 115 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 A6NNC1 897 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 J3QT63 122 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 CRYAAP02489 173 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 LHX2P50458 406 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 MRPS11P82912 194 aaKnown RBP14.79□□□□□ -0.04
RAB40C-205ENST00000539661 TCTEX1D1Q8N7M0 179 aa14.79□□□□□ -0.04
RAB40C-205ENST00000539661 RAB29O14966 203 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 IL6RP08887 468 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-205ENST00000539661 CCL2P13500 99 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 TRIP6Q15654 476 aaKnown RBP14.78□□□□□ -0.04
RAB40C-205ENST00000539661 ARSJQ5FYB0 599 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-205ENST00000539661 DUSP23Q9BVJ7 150 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 PRRG4Q9BZD6 226 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 RBFOX2O43251 390 aaKnown RBP eCLIP14.78□□□□□ -0.042e-11■■□□□ 12.3
RAB40C-205ENST00000539661 ZG16O60844 167 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 CRISP2P16562 243 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 G6PCP35575 357 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 TIMP3P35625 211 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 CATR1Q13166 79 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 TCF23Q7RTU1 214 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 Q8IYB0 196 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 OR5AU1Q8NGC0 362 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 OR10G8Q8NGN5 311 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 WDR83OSQ9Y284 106 aa14.78□□□□□ -0.04
RAB40C-205ENST00000539661 URB1O60287 2271 aaKnown RBP14.77□□□□□ -0.04
RAB40C-205ENST00000539661 A0A0G2JMM0 328 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 A0A1W2PPB8 328 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 A0A1W2PRS3 328 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 KIR3DP1A8MWS1 328 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 IGHV3-9P01782 118 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 LINC00310P59036 64 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 Q0VG73 95 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 IL11RAQ14626 422 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 Q8N7P7 452 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 ZNF114Q8NC26 417 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 POM121L2Q96KW2 1035 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 DERL1Q9BUN8 251 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 PATZ1Q9HBE1 687 aaKnown RBP14.77□□□□□ -0.04
RAB40C-205ENST00000539661 OCIAD1Q9NX40 245 aa14.77□□□□□ -0.04
RAB40C-205ENST00000539661 TRAV39A0A0B4J263 110 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 A0A1W2PR80 420 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 LNP1A1A4G5 178 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 GRIFINA4D1Z8 144 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 RAMP3O60896 148 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 CLDN14O95500 239 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 NGFP01138 241 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 EGR1P18146 543 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 CD82P27701 267 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 ARR3P36575 388 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 EIF4EBP1Q13541 118 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-205ENST00000539661 COL5A1-AS1Q5SY13 56 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 HSPB9Q9BQS6 159 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 AURKAIP1Q9NWT8 199 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-205ENST00000539661 IL36BQ9NZH7 164 aa14.77□□□□□ -0.05
RAB40C-205ENST00000539661 COLQQ9Y215 455 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-205ENST00000539661 BOD1L1Q8NFC6 3051 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 A0A1W2PPV4 95 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 MPDU1O75352 247 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms