RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 VEGFCP49767 419 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 GABARAPL2P60520 117 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZNF383Q8NA42 475 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 GFI1Q99684 422 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 CMSS1Q9BQ75 279 aaKnown RBP15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ELOVL1Q9BW60 279 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZMAT4Q9H898 229 aa15.14■□□□□ 0.01
TNFRSF1B-204ENST00000536782 DENRO43583 198 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 MRPS14O60783 128 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 HSMCR30P0CW71 290 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 SNRPBP14678 240 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 TMEM50BP56557 158 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 LINC00205P59089 165 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 FXYD3Q14802 87 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RAB11BQ15907 218 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 CASC10Q5T4H9 136 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ARHGAP5-AS1Q96IT6 56 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 PECRQ9BY49 303 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZNF355PQ9NSJ1 428 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RDH8Q9NYR8 311 aa15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 AK6Q9Y3D8 172 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ARL6IP5O75915 188 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 SRSF7Q16629 238 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 TMEM91Q6ZNR0 172 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZNF367Q7RTV3 350 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 GRPEL2Q8TAA5 225 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 MGLLQ99685 303 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 STUB1Q9UNE7 303 aa15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1B-204ENST00000536782 IGKV1-6A0A0C4DH72 117 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 C13orf42A0A1B0GVH6 325 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 TRDCB7Z8K6 153 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 H3BUA1 57 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 M0R1X1 148 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 SLC25A17O43808 307 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 MAP2K4P45985 399 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 POC5Q8NA72 575 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 OR56B1Q8NGI3 324 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RANGRFQ9HD47 186 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 SLC35D1Q9NTN3 355 aa15.11■□□□□ 0.01
TNFRSF1B-204ENST00000536782 CNIH1O95406 144 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ZP3P21754 424 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RANBP1P43487 201 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 SERPINB10P48595 397 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 CLDN12P56749 244 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RPS25P62851 125 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 HAPLN4Q86UW8 402 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ANKRD13BQ86YJ7 626 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 OR5T1Q8NG75 326 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 OR4A4PQ8NGN8 299 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 FAM3DQ96BQ1 224 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 RSRP1Q9BUV0 290 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 YTHDF1Q9BYJ9 559 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 ACOT13Q9NPJ3 140 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 CSMD3Q7Z407 3707 aa15.1■□□□□ 0.01
TNFRSF1B-204ENST00000536782 A0A0G2JLM5 398 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 IGLV1-51P01701 117 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 LGALS7P47929 136 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 MRPS15P82914 257 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 C2orf76Q3KRA6 126 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 PLAC9Q5JTB6 97 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 TMEM68Q96MH6 324 aa15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 EPPK1P58107 5090 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1B-204ENST00000536782 IGLV2-23P01705 113 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 LYL1P12980 280 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 CALRP27797 417 aaKnown RBP15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 MOGAT2Q3SYC2 334 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 V9GY05 133 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 DNAH1Q9P2D7 4330 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 STARD9Q9P2P6 4700 aa15.08■□□□□ 0
TNFRSF1B-204ENST00000536782 LYSTQ99698 3801 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 ANKRD34BA5PLL1 514 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 BET1O15155 118 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 LDLRAD4O15165 306 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 FABP7O15540 132 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 CD3GP09693 182 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 IGHV4-30-4P0DP06 118 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 PSMD7P51665 324 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 SSBP2P81877 361 aaPredicted RBP15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 PJVKQ0ZLH3 352 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 Q8N1Y9 231 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 OR2D2Q9H210 308 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 PALMDQ9NP74 551 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 SDHAF2Q9NX18 166 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 TNCP24821 2201 aa15.07■□□□□ 0
TNFRSF1B-204ENST00000536782 CRYGBP07316 175 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 FABP5Q01469 135 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 TAGLNQ01995 201 aaKnown RBP15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 CBX3Q13185 183 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 KLF5Q13887 457 aaPredicted RBP15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 IGSF11Q5DX21 431 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 SGPP2Q8IWX5 399 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 OR10J5Q8NHC4 309 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 RAB3CQ96E17 227 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 HARBI1Q96MB7 349 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 CITED4Q96RK1 184 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 TM2D3Q9BRN9 247 aa15.06■□□□□ 0
TNFRSF1B-204ENST00000536782 CABLES2Q9BTV7 478 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms