RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 RFX4Q33E94 735 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 ZBED5Q49AG3 693 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 KIAA2026Q5HYC2 2103 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 HIST2H3PS2Q5TEC6 136 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 WDR82Q6UXN9 313 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 HIST2H3AQ71DI3 136 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 GDPD3Q7L5L3 318 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 CYP4Z1Q86W10 505 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 PGAM4Q8N0Y7 254 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 OR6V1Q8N148 313 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 FAM86B1Q8N7N1 296 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 EIF1ADQ8N9N8 165 aaKnown RBP2.28□□□□□ -2.04
PABPC1-206ENST00000518293 OR56B2PQ8NGI1 322 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 OR51A7Q8NH64 312 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 ANGPTL6Q8NI99 470 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 ZNF596Q8TC21 504 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.28□□□□□ -2.042e-7■■■■■ 64.2
PABPC1-206ENST00000518293 SLC7A6Q92536 515 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 RNF170Q96K19 258 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 GAFA1Q96PS6 74 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 LYSTQ99698 3801 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 SH3GL1Q99961 368 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 NRIP2Q9BQI9 281 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 ROPN1BQ9BZX4 212 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-206ENST00000518293 RGCCQ9H4X1 137 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 TUBA4BQ9H853 241 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 NMNAT1Q9HAN9 279 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-206ENST00000518293 EDA2RQ9HAV5 297 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 ENPP5Q9UJA9 477 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 KLK5Q9Y337 293 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-206ENST00000518293 AMMECR1Q9Y4X0 333 aaPredicted RBP2.28□□□□□ -2.04
PABPC1-206ENST00000518293 HILPDAQ9Y5L2 63 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 GMEB1Q9Y692 573 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 HSPE1-MOB4S4R3N1 261 aa2.28□□□□□ -2.04
PABPC1-206ENST00000518293 DNAH7Q8WXX0 4024 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 SRRM2Q9UQ35 2752 aaKnown RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 DNAH9Q9NYC9 4486 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 CSMD3Q7Z407 3707 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 NUPR2A6NF83 97 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 OR5B21A6NL26 309 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 C17orf98A8MV24 154 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ODF3BA8MYP8 253 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 H7C1C5 153 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 OVOL1O14753 267 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 FGF16O43320 207 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 AKR7A2O43488 359 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 SPAG7O75391 227 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 E2F6O75461 281 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 IL12AP29459 219 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 RPS10P46783 165 aaKnown RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 BLVRAP53004 296 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 LCN6P62502 163 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ACTA2P62736 377 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 GNG3P63215 75 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ACTG2P63267 376 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ACTC1P68032 377 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ACTA1P68133 377 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 PRKCDQ05655 676 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ZNF616Q08AN1 781 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 DGUOKQ16854 277 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 HCP5Q6MZN7 132 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ERICH5Q6P6B1 374 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 SLC35E3Q7Z769 313 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 CROCCP2Q86T23 111 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 NKAIN4Q8IVV8 208 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ZNF676Q8N7Q3 588 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 C15orf54Q8N8G6 183 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 OR2AE1Q8NHA4 323 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 PFN4Q8NHR9 129 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 FAM81AQ8TBF8 368 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 C4orf3Q8WVX3 66 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 C17orf50Q8WW18 174 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 Q96M85 177 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ZNF714Q96N38 554 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 PRSS27Q9BQR3 290 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 COPS4Q9BT78 406 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 MAGT1Q9H0U3 335 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 TLNRD1Q9H1K6 362 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 SYT4Q9H2B2 425 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 TMEM133Q9H2Q1 129 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 GAL3ST2Q9H3Q3 398 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ANKRD19PQ9H560 264 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 NIPAL2Q9H841 368 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 PLEKHA1Q9HB21 404 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 SLC35D1Q9NTN3 355 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 CYB5R1Q9UHQ9 305 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 ERGIC3Q9Y282 383 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 POLDIP2Q9Y2S7 368 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 FAM32AQ9Y421 112 aaKnown RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 N6AMT1Q9Y5N5 214 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 LHFPL6Q9Y693 200 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 DNAH1Q9P2D7 4330 aa2.27□□□□□ -2.05
PABPC1-206ENST00000518293 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
PABPC1-206ENST00000518293 TRAV27A0A087WT01 109 aa2.26□□□□□ -2.05
PABPC1-206ENST00000518293 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms