RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 SEMA5BQ9P283 1151 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 A0A1W2PNU3 283 aaPredicted RBP9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CRYAAP02489 173 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 IFI6P09912 130 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 IRF2P14316 349 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 WNT5AP41221 380 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SPATA45Q537H7 98 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 OR10J5Q8NHC4 309 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SLC25A40Q8TBP6 338 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ANAPC16Q96DE5 110 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MIEN1Q9BRT3 115 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 WIPI2Q9Y4P8 454 aa9.21□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PRRG2O14669 202 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ARR3P36575 388 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FUT6P51993 359 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SPINK9Q5DT21 86 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PLAC9Q5JTB6 97 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SLC24A4Q8NFF2 622 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PSENENQ9NZ42 101 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 GALR2O43603 387 aaPredicted RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MT-CO2P00403 227 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PTGER4P35408 488 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PAFAH1B2P68402 229 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FBXW9Q5XUX1 488 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 LHFPL2Q6ZUX7 228 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 H1FXQ92522 213 aaKnown RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PROK2Q9HC23 129 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 DYNLRB1Q9NP97 96 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 NBEAQ8NFP9 2946 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 UBE2L5PA0A1B0GUS4 154 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FAM90A27PA6NNH2 459 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CHST1O43916 411 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CRYABP02511 175 aaKnown RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CEACAM1P13688 526 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CD99P14209 185 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MPZP25189 248 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 IZUMO4Q1ZYL8 232 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF573Q86YE8 665 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 H1FOOQ8IZA3 346 aaPredicted RBP9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 LYZL4Q96KX0 146 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CLCF1Q9UBD9 225 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 NKX2-6A6NCS4 301 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 PPIHO43447 177 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF253O75346 499 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FAM87AP0C7U9 286 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 KLF3P57682 345 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CCL20P78556 96 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RNPS1Q15287 305 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 TMEM252Q8N6L7 170 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FAM122AQ96E09 287 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 NEIL1Q96FI4 390 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 IGHV3OR15-7A0A075B7D8 119 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 TRBV6-7A0A0A0MS04 114 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 COX5AP20674 150 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 IL24Q13007 206 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 P2RY6Q15077 328 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 STUMQ69YW2 141 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 GGNQ86UU5 652 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZCCHC24Q8N2G6 241 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ANXA10Q9UJ72 324 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RRP8O43159 456 aaKnown RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RAC2P15153 192 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RIPPLY2Q5TAB7 128 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SGMS2Q8NHU3 365 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ABHD14AQ9BUJ0 271 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF391Q9UJN7 358 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 WASHC3Q9Y3C0 194 aa9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MUC22E2RYF6 1773 aaPredicted RBP9.19□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 KRASP01116 189 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 TMEM50BP56557 158 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 C3orf85A0A1B0GTC6 90 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RHBDL1O75783 438 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 GYPAP02724 150 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZNF17P17021 662 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 HGFACQ04756 655 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 CSRP2Q16527 193 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 ZCCHC14Q8WYQ9 949 aaKnown RBP9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 SPSB1Q96BD6 273 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 RTL8AQ9BWD3 113 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 LPAR2Q9HBW0 351 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 USF1P22415 310 aaPredicted RBP9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 UCP3P55916 312 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 FOXF2Q12947 444 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 C1orf100Q5SVJ3 147 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 C1orf194Q5T5A4 169 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 MRGPRDQ8TDS7 321 aa9.18□□□□□ -0.94
MSH5-SAPCD1-207ENST00000493662 LOXL4Q96JB6 756 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms